Seriola dumerili (greater amberjack): 111229643
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Entry
111229643 CDS
T05606
Symbol
lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111229643 (lingo1)
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
111229643 (lingo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_9
LRR_Zer-1
Ig_2
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
111229643
NCBI-ProteinID:
XP_022611778
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MVAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETRLLDLSKNRIRTINPDEFANFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSTVPTEAFTHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPLIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggccggggaagcgaccgggcacagctacctggtggcttgctggcagcccattctg
atcctgatgctgggcactgtgctgtctggctccaccacaggctgtccctcccgctgtgag
tgcaatgttcaagagcgctctgtgatgtgccaccgcaagaagctcatgacggttccagag
ggcattcctgcagaaacaagactgctggatctcagcaagaaccgcattagaaccatcaac
ccagacgagtttgccaactttcccaacctcgagcacctggagctcagtgaaaacacgatc
tccactattgaacctggagcgttcaacaacctttatggcttgcggacattggggctgcgc
agcaacaagcttaagctgatccagctcggtgtcttcacaggcctgagcaatctcacgcag
ctggacataagtgagaacaagattgtcatcctgttggactacatgttccaggatttgtac
aacctccggtctttagaggtgggtgataacgacctggttttcatttcccaccgagctttt
catggcctaagtagccttgagcacctgagtcttgagaagtgcaacttgtccactgtgcca
acagaggcttttacccacctccacagtttgatcactctcaggcttcgccacctcaatatc
aatgtgatacgggattactcctttaaacggctctatcggctcaaagtgttggaaatagcc
aattggccatatttggatacgatgaccccaaattgcttatatggattaaatctcacctcc
ctgaccattgcaaatgccaacctgaccacaattccttatgtagccctgcggcacttggtt
tatttgcgctttctgaatctttcatacaaccctatccacaccattgaggggaataagctc
catgatcttctgcgtctgcaggaatttcacctggtgggaggcagactggcaatgattgag
ccctactctttccgtggtctaaactacctgaagattctcaatgtgtctgggaactctctt
agcactttagaggagtctgctttccattcagtaggcaacctggaaaccctcgccttgtat
gataatcccctggcctgtgactgccgactgttatgggttttcagacgacgttggcgactg
aacttcaacaggcagcagcccacctgtgcctctcccgagtttgtccaaggcaaagaattc
aaagacttcccggatgttctgcagcctaattacttcacgtgtcgcaagtccaggattagg
gatcgcaaaccccagcagaaatttgtcgacgagggagccattgttcattttgcttgccaa
gcagatggagatcctgctccgttgataatgtggctatccccgcagaaaaagttcatcacc
acgaagacaattggaaggctctctgtgttgccagacggtaccctcgaggtgcgctatgcc
cagattcaagacaatggtacatatgtgtgtatagctagcaacgcaggcggaaatgacacc
tctcttgctcacctgcacattcatagctactcgcctgactggccgcaccagcccaacaag
acttttgccttcatctccaaccagcccacagaaactggtgctaatggcacaagagccaat
gtccctttcccatttgatataaagacgttgatcattgcgaccacaatgggcttcatctct
ttcctcggtgtcgtcttgttttgcctggtgctgctcttcctctggagcagaggtaaaggc
aacactaaacacaacattgagattgagtatgtgccacggaaatcggacgctggcatgagc
agcagcacagtggatgctcctcgcaagtttaacatgaaaatgatttaa
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