Seriola dumerili (greater amberjack): 111229714
Help
Entry
111229714 CDS
T05606
Symbol
sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111229714 (sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111229714 (sin3a)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
111229714 (sin3a)
REST complex
111229714 (sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
111229714 (sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
111229714
NCBI-ProteinID:
XP_022611884
UniProt:
A0A3B4VQ34
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MKRRLEDQEAVFASPQRRLAGSAEAFQHRVLAPAPAPAVYEAVSDNMQPTAGVQYSVPQG
YQVPTVAQNSGGHGHTPSPAVHGGSHHHSPAVQSHGPPVMSGHSHTAVPQASAQGQQQFQ
RLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLI
MGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITGAATQHQPQLPPAAT
TTAPPLLTQPTPAKMSKPLQPQALTPSSQSNPSIPAYTSPRSPPMQLHPPLSGTPTGPPM
QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ
EVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLNKTTAEKAESVRNDHGGTAKKLQLNNK
QRPNQNGCQIRRHPAPGTTPPVKKKPKLLNLKDSSVAEASKHGVGTESLFFEKVRKALRS
AEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHIETYPKE
RATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDST
FVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQRKLSRMSAEEQAKFRLDNT
LGGSSEVVHRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKI
WREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEENATPPTGPH
LTLAYEDSQILEDAAALIIHHVKRQTSIQKEDKYKIKQIIYHFIPDMLFSQRGELSDVEE
EEEEEEMDLEEGASKKHNGVPSSGSPSKSKLLFSNTAAQKLRGCDDAYNLFYVNNNWYIF
LRLHQTLCSRLLRLYGQAERQIEEEVRERDWEREVLGLKKEKNDNPAIQLRLKEPMDIEV
EDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDE
ICVQVTDLYLAESTNGASGGTMSTQSSRSSAEATYQRKAEQLMSDENCFKVMFLRNRGHV
QLTVELLDTEEENSDEPMEAERWSDYVGRYLNPDSTTPELREHLAQKPVFLPRNLRRIRK
YQKGREQLDKEACEGGKKSLEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHE
RVSTRLHKRFHAWVEAWVKEHVTRDMSAETNKWLMGEGRDGFLPCTTSRQPEVLHFMNIN
KYRVKYGPPGKAP
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgactggaggatcaggaagcggtttttgcgtccccgcagcggcgcctcgct
ggcagtgcggaggctttccagcatcgtgtcctggcccctgctccagctccagctgtgtat
gaggccgtgtctgacaacatgcagcccacagcaggcgtccagtactccgtcccccaggga
taccaggtccccaccgtggcccagaacagtggcgggcatgggcacaccccaagcccagcc
gtccatggggggtcccaccaccatagcccggcagtccaatcccacgggcccccagtgatg
tcaggacacagccatacggctgttcctcaagcctcagcacagggccagcagcagtttcag
aggctcaaggtggaagatgctttgtcttatctggaccaagtgaaactgcagtttggcaac
cagcctcaggtctacaacgactttttggatataatgaaagagttcaagtcccaaagtatt
gacactccaggggtcatcagcagagtgtcacagcttttcaaaggtcatcctgacctcatc
atgggtttcaacaccttcctgccaccgggctacaagattgaggtccagaccaatgacctg
gtcaatgtgacaacacccggtcagatccaccacatcaccccacacggcatttcagtccag
aacatccccataacaggagcagctacccaacaccaaccccagctcccacctgcagcaacc
accaccgctccacctcttctaacacagcctacccctgccaagatgagcaagcctctccag
cctcaggccttgacaccgagcagccagagcaatccgtccatccctgcgtacacatctccc
cgttccccgcccatgcagctccacccacccctcagcgggacccccaccggtccacccatg
cagaacaaccagcccgtggagttcaaccacgccatcaactacgtcaacaaaatcaagaac
cgcttccagggccagcccgacatttacaaagccttcctggagatcctccacacgtaccag
aaggagcagcgtaatgcgaaggaggccggagggaactacacgccggctctgacggagcag
gaggtttacgctcaggtggccaggctcttcaagaatcaagaggacctgctctcagaattt
gggcaattcctacctgacgccaacagttcagtgctgttaaataagaccacagccgagaag
gcagagtctgtacggaacgaccacggtggcactgccaaaaagctgcagctcaacaacaaa
cagaggcccaatcagaacggctgccagatccgtcgacatccagccccagggaccacgccg
cccgtcaagaagaagcccaagttactgaatttgaaagattcctcagtggcagaagccagc
aagcatggagtcggcactgaatctctgttctttgagaaggtgcgaaaagccttgcgaagt
gccgaggcctatgacaacttcctgcggtgtctggtcatctttaatcaggaggtgatctcc
agggctgaactggtgcagttggtgcttccctttttaggaaaattccctgagctgttcaac
tggtttaaaaatttcctgggatatcgggaaatgtcccacatcgaaacctaccctaaggaa
cgggccaccgagggcatcgccatggagattgattatgcttcctgtaagagactaggctcc
agttacagagccctgcccaaaagctaccagcagcccaaatgcactggcagaactccactt
tgtaaagaggtcttaaatgacacctgggtctccttcccctcctggtctgaggactccaca
tttgtcagttccaagaagactcagtatgaggagcatatctacagatgtgaggatgaacgc
ttcgagttggatgtagtactggagacgaacctggccaccatcagagtcctggagacggta
cagcggaagttgtcacgcatgtctgccgaggagcaagctaagtttcgcttggacaacaca
ctgggcggctcctccgaggtcgtgcaccgcaaggccatccagaggatatacggagacaaa
gcccccgacatcatcgacggcctgaagaaaaaccctgcagtctctgtccccattgtgtta
aagaggttaaagacgaaggaggaagagtggcgggaagcccaacggggcttcaacaagatc
tggagggagcagaatgagaagtattacctcaagtctctcgaccatcaaggcatcaacttc
aaacagaacgacaccaaagtgcttcgatccaagtccctgctaaatgaaatcgaaagcatc
tacgatgagcgccaggagcaggcctctgaggaaaacgccaccccacccacaggcccccac
ctgacactggcctacgaggacagtcagatcctggaggacgcagcagcgctcatcatccac
cacgtgaagcgacagacaagcattcagaaggaggacaagtacaagatcaaacagatcatc
taccacttcatccccgacatgctgttctcccagcggggcgagctctccgacgtggaggag
gaagaggaggaagaggagatggatctagaggaaggagcctccaaaaagcacaacggtgtc
cccagcagcgggagcccctccaagtccaagctgcttttcagcaacacggcggcgcagaag
ctgcgcggctgcgacgacgcctacaacctcttctacgtcaacaacaactggtatatcttc
ctgcggctgcaccagacgctgtgctcgcgcctactgaggctgtacgggcaagcggagcga
cagatcgaagaggaggtcagagaacgagactgggagagggaagtcctgggactcaagaag
gaaaagaacgacaatccagccatccagctgagactgaaggagcccatggacattgaggtg
gaagattactactcagccttcttggagatggttaggaatctgctggatggaaacatggag
gcctctcagtatgaggactcgctgagggaaatgttcaccatccacgcttacatcgccttc
acaatggacaagctcatccaaagcatcgtccggcagctccagcacatcgtgagcgacgaa
atctgcgtccaagtgacagacctctacctggcagagagcaccaacggggccagcggagga
accatgtccacccagtcctcgaggagctccgcagaggccacctaccaacggaaagccgag
cagcttatgtctgatgagaactgcttcaaggtgatgtttttgagaaacagagggcatgtg
cagctcacagtggagctactcgacacggaggaggagaactcagacgagcccatggaggct
gagcgttggtctgattatgttggacgctacttaaacccagattccaccacacctgagttg
agggagcacctcgctcagaagcctgtttttcttcccaggaatctgagacggatcaggaag
taccagaagggccgagagcagctggacaaggaggcctgcgagggcggcaagaaatccctg
gaaaaggagaaaatggagtgcatgttcaagctcaactcttacaagatggtctacgtcttc
aagtctgaggattacatgtaccgacgcactgccctgctgcgagctcaccagtcacatgag
cgggtgagcacacggctgcacaaacgcttccatgcctgggtggaggcgtgggtcaaggag
cacgtcacccgcgacatgagcgccgagaccaacaagtggttgatgggtgaagggcgtgac
ggctttttaccttgcaccacctcccgccagcccgaggtcctacacttcatgaacatcaac
aagtaccgcgtcaaatacggcccaccgggcaaggcgccgtag
DBGET
integrated database retrieval system
