Seriola dumerili (greater amberjack): 111229775
Help
Entry
111229775 CDS
T05606
Name
(RefSeq) transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdu01001
]
111229775
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111229775
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111229775
Protein kinases [BR:
sdu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
111229775
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111229775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
Bromodomain
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PML_CC
PHD-1st_NSD
PRANC
USP7_ICP0_bdg
TTC3
Motif
Other DBs
NCBI-GeneID:
111229775
NCBI-ProteinID:
XP_022611967
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MDGRTEKQESGDAPVIIVENEAESMPVQEEKSGATGQNYLDTCPFCHLNFHSREPKLLPC
LHSFCKKCLPSPSRNLTLMEAPNSLVDSATKPLNVIRCPVCRQECMEIDVVENVFVKDSA
EAPSSTVERTVQLCMTCDDNTEASGFCVDCVEYLCATCVEAHQRVKFTKDHTIRQKTEVS
QEVHGVSTQRPMFCDIHKQEPLKLFCETCDQLTCRDCQLVKHKDHNYQFLEDAYKNHKQH
MESMTHQLQEKKKLIEEVSNSINNGLFQVDQNRASVHNEIKKSICSLILEINKKGKMLIN
QLEAATKDHETVLRKQQEDIGYLSRHLDHVINFTKWATAKNGGTALLYCKRLILFQIGNL
LRAKCSTSFIPQSSVRFQCRSSYWATNIDLGSLVVESVPGHQLVGFQGIPHQLPHPGQGP
SGSPNSFAMGASHNTLAQLQMQVDKLNPQAHWQPQPPPPPWTWYQSVRLQRTVPGPLQGG
SPSHSMPPQPGRRFIVPPPNHISPTSTLPSPGFTPQSLRGMESSSNYQAKPMDIFSSSPL
YTNITPLSINGGVSSSQSRQTIEHTYLNRRNDSAGPIYMLKPNYPQSLPPSLPHRNEQGQ
EISPGYAAVSQVEKPGTVSWKPPETQQTSGAVGSAVKRRRRSSPGPIIVIKDEPEDDSSY
VQNNQRASLPDSTGEHPQISAQGEEQVEQTQARLGDSDEVSCAVCQSGGELLCCDKCPKV
FHLTCHVPSLLKSPSREWFCSFCRDLFVPEMEYDCDSKPEAKTVKKEPDSEGGFPSVDKR
KCERLLLHLFCSDLSSNFQEPISPAVCANNWPTIKRPMNLSTVKKRLEAKQSLCYQGTAE
FVSDIRLLYGNCAALSETVTEVTVAGRKLMELFEEHLRIIFSDQTFPEIKVEMIPTAPPY
SQVSSLDNIPQPAKRQRTCSDSQDAPSCPNGEEAVV
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggatggacgaacagagaaacaggagtcaggggatgctcctgtcatcatcgttgagaac
gaagctgagagcatgccagtacaagaggaaaagtcaggtgcaaccggacagaattacctg
gacacttgccccttttgccatttaaactttcacagtcgagagcccaaacttctgccgtgc
ctgcactctttttgcaagaaatgtttgccttcaccctccaggaatctgaccttgatggag
gcgccaaactccctggttgacagcgcgaccaaaccactgaatgtgatccgctgtccagtc
tgcaggcaggagtgtatggagatagatgtggtggaaaacgtgtttgtgaaggactcagca
gaggctcccagcagcacagtggagaggacagtccagctctgcatgacttgtgatgacaac
accgaagcttccgggttttgtgtggactgtgttgagtacctctgtgccacatgtgtggag
gcgcatcaaagggtcaaattcaccaaggaccacaccatcagacagaagacagaagtatca
caagaggtccatggtgtgtcgactcagaggccgatgttctgcgacatccacaaacaagag
ccactgaagctgttctgtgagacctgtgaccagctgacctgtcgcgactgccagctagta
aagcacaaggaccacaattaccagttccttgaagatgcttataaaaaccacaagcagcac
atggagagtatgacccatcagctgcaggagaagaagaaactgattgaagaggtgtcaaac
tccataaacaatggactgtttcaggttgatcaaaatcgtgcgtctgttcataatgaaata
aagaagtccatctgcagtttgattctggagataaacaaaaagggcaagatgctgattaat
caacttgaggctgcaacaaaggatcatgagaccgtcttgcgaaagcaacaggaggacatc
ggctatctatccagacacctggatcatgtcatcaacttcaccaaatgggccacagccaag
aacgggggcacggccctcttgtactgtaaacgtctgattctgtttcagattggaaacctc
ctgcgggcaaaatgcagtacctcgtttataccacagagcagtgtacgcttccaatgtcga
tcctcttattgggccacgaatattgatctgggctctttagtggtggagagtgtaccaggc
caccagctggttggttttcagggtatccctcatcagctgccccaccctgggcaaggaccc
tcaggctcacccaacagctttgccatgggagcttcccataatactctggctcagctccag
atgcaggtggacaagctaaacccgcaggcccactggcagccgcagccacctcctccaccg
tggacatggtaccagagtgtccgactacagcgaactgtcccagggcccctgcagggaggc
tctccctcccacagtatgcccccacaaccaggccgtagattcattgtgcctcctcccaac
cacatcagcccaactagcaccttacccagccctgggtttacgccccagtctctgaggggg
atggaaagcagctccaactaccaagccaagcctatggacatattttcctcttcacctctg
tacactaatattacgccactgtccataaatggtggcgtgagttcatcccagtcacgacag
acaattgagcacacgtatctgaacaggaggaacgattcagccggtccgatatatatgctg
aaaccaaactatccccagagtctgccaccttctttgccacacagaaatgagcaaggacag
gagatttcaccagggtacgctgctgtatcccaagtggagaaaccagggacggtttcctgg
aaacccccagaaacacaacagaccagtggagcagtgggctcagctgtgaagagaagacga
aggtcgtcaccagggcccatcattgtcatcaaagatgagccagaagatgacagcagctat
gtacaaaacaaccaaagagccagccttcctgacagcacaggtgaacacccgcaaatcagt
gcccaaggagaagagcaggtagaacaaactcaagctcggctgggagactctgatgaggtc
tcgtgtgctgtgtgtcagagtggaggagagctgctgtgctgcgataagtgtcccaaagtt
tttcaccttacgtgccatgttccatctctcctaaaatctcccagtcgggagtggttttgc
tctttctgccgtgacctgttcgtgcctgagatggagtatgactgtgacagcaaacctgag
gccaaaacagtgaagaaggagccagactctgaaggaggatttccctctgtggacaaacga
aagtgtgagaggctgttgctgcacttgttttgcagtgacctgagttcaaactttcaagag
cccatatcccccgcggtatgtgctaataactggccgactataaagaggccgatgaatctt
tcaactgtgaaaaaacgactggaggctaagcagagtctgtgctaccaaggcactgcagag
tttgtatcagacatcaggctcctctacgggaactgtgcagctctcagtgagactgtcaca
gaggtcaccgtggcaggcaggaagctcatggagctgtttgaagaacacctgaggatcatc
ttttctgaccaaaccttcccagaaatcaaagtggagatgatacccactgccccgccttac
tctcaagtctcgtctcttgacaatatcccccagccagcaaagcgccagcgcacatgttca
gactcccaggatgcaccaagctgtcccaatggagaagaggcagtagtgtga
DBGET
integrated database retrieval system
