Seriola dumerili (greater amberjack): 111229971
Help
Entry
111229971 CDS
T05606
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111229971 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111229971 (cnot3)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111229971 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111229971 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
DUF4407
Motif
Other DBs
NCBI-GeneID:
111229971
NCBI-ProteinID:
XP_022612209
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRFHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDEMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGIPPVPTSSSLIGSFSSAVQQHQHQP
AQQQQQPQPPNQPQQQQQQPTQTKPSVPSNNTPSPPSNPLLPASTAPSLLTPSTPSLSVP
NSQSQPTSGPTPASSLGIGLGLGLSKGGLTGTSSANQMPGLGLGGHPTPLNTMAGLLSGS
TPAPYAQAAASGGLGLSSTTQSSISVESSTSIPTSGSSGVTTNGAGTGLGLLGSSPAHSS
LSGSILGLVPGQSVAPGASQVPPSSVSTTSSVVGMMGGNGGNVGVVGGVGVNAAPARPPS
GLKQNGSTSYSAVVAESSTESALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSITLPPS
SPSPSFSDSTPGGGSLLNGPHSYTQASEGLKAPEPLSSLKAMAERAALGSGLDGEIPNLH
LTDRGRNDIFSGSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESA
WTHMPHPSDSERIRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFYYLEGT
KAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFT
FEYRYLEDRDLQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgagatcgatagatgtttgaaaaaagtagctgaa
ggcgtagaacagtttgaagatatctggcaaaagctccacaatgcagccaatgcaaatcag
aaggaaaaatatgaggctgacctcaagaaagagattaaaaaactacagcgattgagagac
cagataaaaacatgggtggcctcaaacgagatcaaagacaaaaggcagctagtcgagaac
cgcaaacttatagagacgcaaatggagcggtttaaggtggtggaacgtgaaacaaaaaca
aaagcctattctaaagaaggcttggggctcgctcagaaagtggatccagctcagagggaa
aaggaggaaacgggacagtggctaacaaatacgatagacactctaaatatgcaggtggat
cagtttgaaagtgaggtggaatctctttcagtacagacgagaaagaagaagggtgataaa
gagaagcaagaccgtattgaagagctcaagcggttgattgagaggcatagattccacatt
cgtatgttggagaccattttacgaatgctggacaatgactctgtgccagtggatgcaatc
cagaagatcaaggatgatgttgaatactacattgattcgtcccaagacccagactttgag
gagaacgaattcctgtatgatgacttagacctggaagacatccctgcagcattagttgca
acttctccgtcaggtcagggaaatgtggaagatgagatgtatctccactccagcagcact
cccacttccaccacctcctcttcacccatccctccatccccggccacttgcactgctgag
aactcagaggacgataagaaaaggggacggtcgacagacagtgaagttagtcagtcacct
gtgaagaatggcaccccatccttgctatcttctttctcttcctccaccacctctgggtcc
tcctcatcctcctcccttgtgtccatggcgagtgttgttggaggcattcctccagtcccc
acgagcagcagtctaataggaagcttcagcagtgcggtgcagcaacatcaacatcaacct
gcacaacagcagcaacaacctcagccaccaaaccaaccgcagcaacaacagcagcagcca
actcagacaaaaccttctgtcccctcaaacaacacccccagcccacccagcaacccccta
ctcccagcctccactgccccctctctacttacacccagcacacccagtttatcagttccc
aactctcagtctcagcccacatccgggcccaccccagcatccagtttgggaatcgggcta
gggctgggattgagcaaaggtggcctgacagggaccagcagtgccaaccaaatgcctggt
ttagggctgggtggccaccccacacctctaaacacaatggcagggctcctttcgggttcc
acacctgccccttacgctcaggcagcagcatcaggaggcttgggtctgagcagcaccacc
cagtccagcatttcagtggagagcagcacttccattcccacctctggctccagtggagtc
actaccaacggggcggggacagggcttggtttactcggttccagtccggctcacagctct
ctgagtgggagtattctgggtctggttcctggccaaagtgtggcccctggtgcctcacag
gtgcccccaagttctgtcagcactacctccagtgtagttggcatgatgggaggaaatgga
gggaacgtcggcgtggttggaggagtaggggtgaatgctgctcctgctagaccaccaagt
ggactcaagcaaaatggaagcacaagttacagtgctgtagtagcagagagctccacagaa
tcagctctaagcacaccgagccagtcgcaaagcagccaaccctcatctctcagttcctca
accagtcagccgatggacaatggtcccagtttaatcagctccattaccctgcctcccagc
tctccgtccccctcattctcagacagcacacctggtggagggagtcttctcaatgggccc
cactcctacacacaggcctctgagggcctcaaggctcctgagcctctcagttctctgaag
gcgatggctgagagagcagcactgggatcaggcctagatggagagattcccaacctgcac
ctgacagacagaggtcggaatgacatcttctctggttcatctgcggcacccggcacacct
gccgcccctcagccgtccgtgtcggaagtcagcatccccccatcgctcggggtctgtcca
ctgggccccacccctctccccaaagaccagctctatcagcaggccatgcaagagtccgcc
tggacacacatgccacacccctcagactctgagaggatcaggcaatacctgatgaggaac
ccgtgtcccaccttgccattccatcatcagataccaccgcaccactctgattccatagag
ttctaccagagactgtccacagaaactctctttttcatcttctactacctggagggcacc
aaggctcagtatctgtctgccaaggctctgaagaaacagtcatggaggtttcacaccaag
tacatgatgtggttccagaggcacgaggagcccaagactatcactgacgagtttgaacag
ggcacttacatttactttgactatgagaaatggggccagaggaagaaggaggggttcacc
tttgagtataggtaccttgaagaccgagacctgcagtga
DBGET
integrated database retrieval system
