Seriola dumerili (greater amberjack): 111230028
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Entry
111230028 CDS
T05606
Symbol
grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04080
Neuroactive ligand-receptor interaction
sdu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111230028 (grik5)
04082 Neuroactive ligand signaling
111230028 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111230028 (grik5)
Ion channels [BR:
sdu04040
]
Ligand-gated channels
Glutamate (ionotropic)
111230028 (grik5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
111230028
NCBI-ProteinID:
XP_022612279
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MPALPALLLSIHFLSFLLVTMPPRSLSQAPLLSSVRMAAILDDQSVCGRGERLALALARE
NINSVMEGPARARVEVDIYELQKDSQYDTTDTMCQILPKGVVSVIGPASSPASGSTVSHI
CGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGAILRSFSYPSASLVCAKAE
CLLRLEELVRRFLISRETLSIRMLDDNLDPTPLLKEIRDDKVATIIIDANASVSYLILKK
ASELGMTSAFYKYILTTMDFPLLRLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWR
EGCDLTYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLMNYL
RMVEYDGLTGRVEFNSKGQRTNYTLRILEKHRGGHKEIGIWYSNNTLIMNSTSLDINVSE
TLANKTLIVTTILENPYVMRKDNYQEFQGNDQYEGFCVDMLRELADILKFSFKIKLVDDG
LYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMTLGISILYRVQLG
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERRDMLENQY
TLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV
PIESPDDLADQTNIEYGTIHGGSTMTFFMNSRYQTYQRMWNYMNSKQPSVFVKSTEEGIA
RVLNSKYAFLMESTMNEYHRGLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ
ENNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWST
RRSAETDEVCPHTCPRRPHRHTPVSVCQEMITEFRNAVSCKKSSRMRRRRPLSSSAALRH
PTRIALGAPRPLRLVREMRLSNGKLYSGAGPLTGGAGGGAGGTGPSDLGPGPQRILDDPL
GANTTPPPPAPTPVMLPARSCTHVRICQECRRIQNLRSGSSIGSTSTRIPPSSAPLPRLP
PPPPPSSSNTDSEGGGGPSPRRLHHSPPPHTPRPIPPPQSSNTTDLLVDQD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcactgctgctgtcaatacacttcctctccttcctgctagtcacc
atgccgccacgctccctcagtcaggcccccctgctctcctccgtccgtatggcggcaatc
ctggacgaccagtctgtgtgtgggcgtggggagcggctggcgctggccctggccagggag
aacatcaacagcgtgatggagggtccggcccgagcccgagtggaagtggacatatacgag
ctgcaaaaagactcccagtacgacactaccgacaccatgtgtcagattctacccaaaggc
gtcgtctctgtgataggtcccgcctccagccccgcctctggttctactgtcagtcacata
tgtggagagaaggagatccctcatgtgaagattggtcctgaggaaactccacgcttgccg
tacctgcgctttgcctctgtcactctgtaccctagcaacgaggacctgagcctggccata
ggagccatcttgcgctcgttcagttacccctcagccagcctggtctgtgccaaggctgag
tgcctgctgagattggaggagctggtccgccgctttctcatctcccgggagacgctgtca
atcaggatgctggatgacaacctggaccctacgccgctgctgaaggagatccgtgacgac
aaagtggccaccatcatcatcgacgccaatgcttctgtctcctatctcatccttaaaaag
gcatcggagctggggatgacatcagcattttacaagtacatcctcaccaccatggacttc
cccctcctgagactggatgatatagtggatgagcagtccaatatcgtgggattctccatg
tttaacactacgcatcccttctacttggagttcatcaggagcctcaacctctcttggagg
gagggctgtgacctgacataccccggccctgcgctctcgtcagcactgatgtttgatgcg
gtgcatgtggtggtgggggcggtgagggaattgaaccgcagtcaggaaataggagtgaag
ccgctcagctgcacctcgcctcagatctggcaacacgggaccagtcttatgaactacctg
cgcatggtggagtacgacggtctgacagggcgtgtggagttcaacagcaaaggtcaaagg
accaactacaccctgcggatcctggagaaacaccgaggaggtcacaaagagatcgggatc
tggtactccaacaacaccctgataatgaattccaccagtctggatattaatgtctcagag
acgctggcaaacaagaccctcattgtcaccaccatactggagaacccatatgtgatgcgt
aaggacaactaccaggaattccagggtaacgaccagtatgagggcttctgcgtcgacatg
cttagggagctggcagacatcttgaaattctccttcaaaatcaagctggtggatgatggg
ctgtatggggctccagagcccaacggctcttggactggcatggttggagagctaatcaac
aggaaagcagacctggccgtggcgggcttcaccatcacatcggagagagagaaagttatc
gacttctctaagccgttcatgaccctggggatcagcatcttgtacagagttcagctgggt
cggaagccaggttacttctcctttctcgatcccttctctccagctgtctggctcttcatg
ctgctcgcctacctggctgtcagctgtgtgctcttcctggctgcaaggctgagcccctac
gagtggtacaaccctcacccgtgtctgcgagagcgcagggacatgctggagaaccagtac
accctgggaaacagcctgtggttccctgttggaggcttcatgcagcagggatcagaaata
atgcccagagccctgtctaccagatgtgttagtggggtgtggtgggcgttcaccctgatc
atcatctcctcctacacggccaacctggcggcctttctgaccgtccagaggatggaggtt
cccatcgagtccccggacgacttggctgaccagaccaacatcgagtatggcaccatccat
ggagggagcaccatgaccttcttcatgaactctcgttaccagacttaccagaggatgtgg
aactacatgaactctaagcagcccagtgtatttgtgaaaagcacagaggagggcattgcc
cgtgtgctcaactccaagtatgccttcctgatggagagcaccatgaatgaataccaccgc
ggcctcaactgtaatctcacacagataggaggcctgctggacaccaagggctacggcatt
ggcatgccactggggtctccgttcagagatgagatcacgctggccatcctccagctgcag
gagaataacaggctagagatactgaagaggaggtggtgggagggaggccaatgtcccaaa
gaggaggaccaccgtgccaagggtctgggcatggagaacattgggggcatcttcgtggtg
ctgatctgtggcctcatcattgccgtgtttgtggccattatggagtttgtgtggtcgaca
cgccgctcggcagagactgatgaggtatgcccccatacctgccctcgccgaccccacaga
cacaccccagtgtctgtctgtcaggagatgatcacagagttccgaaacgccgtctcctgt
aagaagagttcccgtatgcgccgtcggcggcccctcagcagctcagcagccctgcgccac
cccacacgcatagctctaggggcccctcggcccctgcgcctggtgcgggagatgcgcctt
agcaacggaaagctctacagtggagctggccccctgacaggtggagctggaggtggagca
ggggggacagggccttcagatctgggccctggaccacagcggatcctagatgatccgctg
ggggccaacaccacccctcctccaccagcccccacccctgtgatgctgcccgcccgcagc
tgcacccatgtgaggatctgccaagagtgccggaggatccagaacctgagatcaggcagt
agtataggatcaacctcaacaagaataccaccctcatcagcacccctgcccaggctaccc
ccaccccctcctccatcctcatccaacacagacagtgagggtggaggggggcccagccca
aggcggctacatcacagccccccacctcatacccctcgacccattccacctccacagagc
agcaacaccacagacctactggttgaccaggactga
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