Seriola dumerili (greater amberjack): 111230042
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Entry
111230042 CDS
T05606
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111230042 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111230042 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdu04147
]
111230042 (usp5)
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111230042 (usp5)
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111230042 (usp5)
Ubiquitin system [BR:
sdu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111230042 (usp5)
Exosome [BR:
sdu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111230042 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
111230042
NCBI-ProteinID:
XP_022612308
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MADVGEVLMSVLSTIRVPKPGDRVHKDECALSFSSPESEGGLYVCMNSFLGFGSQYVDRH
NARSGQRAYLHITRTRKAKLFSQKEDDNNSGSGHPPKKKPTRLAIGIEGGFDVEQEQYEE
DVKVVILPDRQEVASDDLTTMPDVVRERVSLSMAGIMAADSVSHTLQVQQWDGEVRQESR
HAADLKQLDNGVKIPPSGWRCEVCDLQENIWMNLTDGKVLCGRRYFDGSGGNNHALLHFQ
ETGYPLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLAHFGIDMMTMEKTERTMTELEI
AVNQRVGEWEVIQESGTTLRPLFGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNI
DKIIDEAPSDPTQDFKTQVAKLGYGLLSGEYSKPALDPGDENGASEPRGDQIGIAPRMFK
ALVGRGHPEFSTNRQQDAQEFLLHFINMVERNCRSGPNPSEAFRFLVEERIVCQQSQKAK
YTQRVDYIVQLPVPMDQATNTEELQEAERRREEGDSSAPTVRAQIPFTACMAALSEPEIL
TDFWSSAVQAKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSAL
CATGQQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQLC
EMGFPLEACRKAVYYTGNTGIDAAMNWIMGHMDDPDFSAPLVLPGCSSVTTPTESLSEEH
LATIVSMGFSRDQATKALRATSNVLDRAVDWIFSHLDDLESMDVSEGGRSAAESEGREPP
PGPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGY
LYFYRRVAE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttggtgaggttttgatgtcggttttgtccacaattcgggttccgaagccc
ggggaccgcgtccacaaagacgaatgcgccttgtcattttcctcgccggagagtgaagga
ggcctgtatgtgtgcatgaacagtttcctgggctttgggagtcagtatgtggacaggcac
aatgctcggtctggccagagggcttacctgcacatcacccggactcgtaaggctaagtta
ttctcacagaaggaagatgacaataactctggatctggacacccacctaagaaaaagccc
accagactggccatagggattgaaggaggttttgatgtggagcaggagcagtatgaagag
gatgtaaaggtggtcattttacctgacagacaggaagtggcatcagatgaccttactacc
atgcctgacgttgtgagagagcgggtgtccctgtcaatggcgggtataatggcagctgac
tcagtgtctcataccttacaagttcaacaatgggacggagaggtgagacaggagtccagg
catgccgctgaccttaaacagcttgacaatggagtcaagatccctcccagtggctggcgg
tgtgaggtgtgtgacctccaggagaatatttggatgaacctgacagacggcaaagtgctg
tgtggtcgcaggtattttgatggctctgggggcaacaatcacgcccttcttcacttccaa
gagaccggatacccactcgctgtcaaactcggaaccatcactcccgatggagcagatgtg
tattcctatgatgaggatgacatggtgctggattccaagttaccagagcacctagctcac
tttgggatcgacatgatgaccatggagaagactgagcggactatgacagagctggagatt
gctgtgaaccagcgtgtgggggagtgggaggtgatccaggaatcggggaccactctgcgt
cccctttttggccccgggctgacgggcatgaagaacctgggcaacagctgctacctcaac
tcggtcatgcaagtgctcttcactgttccagacttccagagcaagtacgtttctaacatc
gacaagatcattgatgaagctccaagtgaccccacccaggacttcaaaacccaagtagcc
aagctcggctacggtctgttgtcaggagagtattccaaaccagcactagaccctggagat
gaaaatggtgcatctgaacccaggggagaccaaattggcatagcaccacgaatgtttaaa
gcacttgttgggcggggccacccagagttctccaccaatcgacaacaggatgctcaggag
tttttattgcacttcataaacatggtggagagaaactgtcgctctgggcctaacccatct
gaagccttcaggttcctggtggaggagaggattgtgtgtcagcaatcacagaaagccaag
tacacgcagcgggtagattacatcgttcagctgcctgtgcccatggaccaggctaccaac
acagaagagctccaggaggcagagcgccggcgtgaggagggggactcatcagctcctaca
gtgcgtgcacaaatccccttcacagcttgcatggcggccctcagtgaaccagagatcctc
acagacttctggagctctgctgtacaggccaagactactgctaccaaaacaacccgcttt
gcctctttccctgaccacctggttatccagattaagaagtttacctttggccttgactgg
gtgcccaagaaactggatgtgagtatcgacgttcctgatactctggacctgagcgcacta
tgtgcaaccggccagcagccaggggaggagcttctcccagaggtggccccgcccccactc
atgaccccagatgtggaggttaaaggtatcctgggttcccatggcaacgaggaggacgac
tcactctactccccactgctgtctcccgtcctcgatgactccactgtgtcccagttatgt
gaaatgggattcccactggaggcctgcaggaaagcggtgtactacacagggaacactgga
atcgatgctgccatgaattggatcatgggccatatggatgacccagacttctcagccccc
ctggtgttgccaggctgcagctctgtgaccactcccaccgagagcctgtctgaggaacac
ctggcaaccatcgtctccatgggcttcagccgagaccaagcaaccaaagcacttcgagcc
acgagtaatgtcctggaccgggcagtggactggatcttctcccatctggatgacctagag
tccatggatgtgtctgaaggaggccgctcagccgcagagagcgagggccgggagcctcct
cctgggccccgtgtcagagacggaccaggcaagtacgagctgtttgcattcatcagtcac
atggggacaagcacgatgtgcggccactatgtctgtcacatcaagaaggatcagcagtgg
gtcatcttcaacgatcagaaggtgtgtgcttcagagaaacctcccaaagacttgggatac
ctctacttctatcggagagtggctgaatga
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