Seriola dumerili (greater amberjack): 111230046
Help
Entry
111230046 CDS
T05606
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdu03009
]
111230046 (nop2)
Enzymes [BR:
sdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
111230046 (nop2)
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111230046 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
111230046
NCBI-ProteinID:
XP_022612319
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKSRKQQGAETELAKFITDEETGPKRLSSRGRKRAAKRVQNLKK
PKDVAEEQPKKGFTDENSKWLKPAKRKRKMNEPESEDDSEEHWEEEEDEEEEQELLLQQQ
QKKGGKDQGKKGAKSGVEEEEEEEEEEDDDDDGDDDNDDDDDDEEMVDDYGTLDDGSADE
AAEEESDGEELLPIERAAKKEKKLKETMALGSDDDDEEEDDEGDDDDDEEKSDADMDEED
TVQTNIDEMDKFRLPGAEDTEKEGVLPLDLKTIHQRIKDNIDVLCNFSTKREEGKERAEY
ISLLKKDLCTYYSYNNFLIEKLIDLFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQ
ALINRGVNLDPLGKWSKVGLVIYDSSVPVGATPEYLAGHYMLQGASSFLPVMALSPQEGE
LVLDMSSAPGGKTSYIAQLMRNTGTIVANDANAERLKSVVGNIHRLGVTNTVVCNYDGRQ
FPKVMGGFDRVLLDAPCSGTGVIAKDPAVKTSKDEADIQRSAHLQKELILSAIDSVNAES
PSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGKEGFTRFKERRFHPSLRLT
RRFYPHSHNMDGFFVAKLKKFSNVIPTTPAGKEEENSEAPEAVEAVAESSQEKPSKSDKA
NKTVPGKAGSSKKKGQTNGTAAKEKANIKSKGKKNLPTGPKKAKIAKMDGKTVKGAEAKK
PAVKTTEETKASKAGKKEGSRFEKKQAKKIKSPMKAKNRIGKNKFRKLKHMLQKQDIE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccaacaaggtgaagagagggccagggaaaaaatccagg
aaacaacagggagcagagaccgagttggccaagtttataactgatgaggaaactggacca
aaacgtctgtcaagtagaggcaggaaaagagctgcaaagagagtccagaatttgaaaaag
ccaaaagatgtagcagaggaacagcccaagaaaggattcactgatgagaacagtaaatgg
ttgaaaccagcaaagaggaagcgcaaaatgaatgaacctgaaagtgaggatgacagtgaa
gagcactgggaggaagaggaggacgaggaggaggaacaggagctgctgctgcagcagcag
cagaagaaaggaggaaaagaccaaggaaaaaagggtgcaaaatcaggagtggaagaggag
gaggaggaggaggaggaggaggatgatgatgacgatggtgatgatgacaatgatgatgat
gatgatgatgaagaaatggttgatgactacggcacacttgatgacggcagtgcagatgaa
gcagcagaagaagaaagtgatggagaggaactccttcctattgagcgagcagcaaagaaa
gagaaaaagctgaaagaaaccatggctctagggagtgatgacgatgatgaggaggaagac
gacgaaggtgatgatgatgatgatgaagagaaatcagatgctgacatggatgaagaagac
acagtacaaaccaacatagatgaaatggacaaatttaggctacctggggcagaggacact
gagaaggaaggtgtcttgcctctagacctgaagacaattcatcagagaataaaggacaac
attgatgtcctttgtaatttctcaacaaaaagggaggagggcaaagagagagcagagtac
atctcgctcctgaagaaagatctctgcacctactacagctacaacaacttcctcattgag
aaattaatagacctcttccctctctcagagctggttgatttccttgaggccaatgaaatt
cagagacctgtcactattcggaccaacacacttaaaacgaggaggcgggaccttgcacag
gccctcatcaacagaggagtgaaccttgatccactggggaaatggtctaaagtgggtttg
gtgatctatgactcctcagtacctgtaggtgcaactccagagtacctggctggtcattac
atgctgcaaggagcctccagttttctgcccgtcatggcgctttctccacaggagggagag
ttagtgttggatatgagctctgctccaggaggcaagacctcctatattgctcagctgatg
agaaacacaggcacgatcgtggctaatgacgctaacgctgaaagattgaagagtgtggtg
ggaaacatccaccgtctgggcgtcaccaacactgtggtctgcaactacgatggcaggcag
ttcccaaaggtaatgggtgggtttgatagagtactgcttgatgctccatgctcaggcaca
ggagtcatcgctaaagatccagctgtgaagaccagcaaggatgaggcagacatccagcgc
tctgctcacctgcagaaagagctgattctatctgccatagactctgtcaatgctgagtca
ccttcaggaggatatctggtctactgcacatgttcaataatggtggaggagaatgaatgg
gtggtggactatgctttaaagaaaaggaacgtcaaattagttcccacaggacttgacttt
ggcaaggaaggcttcaccaggttcaaagaacgcaggttccatccttctctgcgactcact
cggcgattttaccctcattcccacaatatggatgggttttttgttgccaaactgaagaag
ttctccaatgtaattccaaccacaccagcagggaaagaagaagagaattctgaagctcct
gaagctgtggaagcagttgcagaatcttctcaggagaaaccgtccaaaagtgacaaggcg
aacaagacggtccccggtaaggcaggcagctcaaagaaaaaaggccaaaccaatggaaca
gcagccaaggaaaaagcaaacatcaagtcaaaaggcaaaaagaacttacccactggacca
aaaaaggcaaagatcgccaagatggatggaaagactgtgaaaggggcggaggccaagaag
cccgcagtgaagacaactgaggagactaaagcatcaaaggctggcaaaaaggaagggagc
agatttgagaaaaagcaggccaaaaagataaaatcacccatgaaggccaagaacagaatt
ggaaagaataaattcagaaagttgaagcacatgttgcaaaaacaagacatagagtga
DBGET
integrated database retrieval system
