Seriola dumerili (greater amberjack): 111230082
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Entry
111230082 CDS
T05606
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111230082 (hnf1a)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111230082 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111230082
NCBI-ProteinID:
XP_022612383
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MRAVFVREAVARKGNRLMEGEDTTRAARARPSRLTALQEQLIWALLGSGLSRDVLVQAMG
ELEQDRVSAGAERGERGDGESSEEGEMDFPPPIFRELEKFPPEEAAKLRVEVDRLLQEDP
WHVAKMVKSYMQQHNLPQREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYVKKQCE
ISQQFTNAKHGLASLEEQGEDTKKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVE
ECNRAECLQRGVSPSQLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTNQSASS
SNLNLPPSPEHGVKYSQQILCDTVSSARGSGGERVGRLAVSPVQLEPSHTLLETHNPKSV
SSGGPLPPVSTLTSLHSLSASPASSQGLIMASLPSIMSLGESSLLIGLASTQPQTVPVIN
NVGGGFTTLQPISFQQQLHASPQQPISQQLQSHMGASPFMATMAQLPCHMYNKSDSPQYH
SSSLLSQAMVITDSSSLGTLTSLAAVRQILTADPEEQTDPPLQEDSLHLQPNTPVPASSE
SLELYPASQTTDSHQSHLLSPSPTDISSYIPTQMVSTAQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagtgtttgttcgcgaggcagtggcgaggaaaggcaacagactaatggaggga
gaggatactaccagggcagccagggcgaggccgagtcgtctgactgcccttcaggagcag
ctgatctgggccctgctgggatctggactgtctcgggacgtcctggtccaagccatgggg
gaactggagcaagacagggtgagcgctggcgccgagaggggagagaggggggatggagag
agctccgaggagggagaaatggatttcccaccgcccatattccgtgagctggagaagttt
cccccagaggaggcagccaaactgagggttgaagtcgaccggctactgcaggaggacccc
tggcatgttgcaaaaatggtgaaaagctacatgcagcagcacaacctccctcagagagag
gtggtggagtccacaggactcaaccagtcccacctctcccagcacctcaacaaaggcacg
cccatgaagaaccagaagagagctgctctgtacagctggtacgtcaagaagcagtgcgag
atcagccagcagtttaccaatgccaaacatggccttgcatcactggaggagcaaggagaa
gataccaagaaaggacggaggaacaggttcaagtggggtccagcatccctgcagatcctt
ttccatgcctatgaacgacagaagaaccccagcaaggaggagagagaggggttggtggag
gagtgtaacagggcagagtgtctccagaggggggtgtccccctctcagctggctggactg
ggctccaacctggttactgaagttcgggtgtacaactggttcgccaaccgccgcaaagag
gaggccttccgtcacaaactggccctcgacacgcctttcaccaaccaatcagcctcatct
tccaacctcaaccttccaccaagtcccgagcacggtgtgaaatacagccagcaaatccta
tgtgacactgtgagctcagccaggggtagcggaggagagagagtgggacgtctcgcagtc
agccctgtccaactggagccaagccacacactcctcgagacccacaaccccaagtcggtg
tccagtggaggcccactgcccccagtaagcactctgacctccctacacagtctgtctgcc
tcccctgcttcctcacagggcctcatcatggcctcactgcccagcatcatgagcctgggg
gagtcctcacttctcattggtttagcctccacgcagcctcagactgtacctgttataaac
aatgtagggggaggtttcaccacgcttcagccaatctcattccagcagcagcttcacgcc
tctccacagcagccaatatcacagcagcttcagagtcacatgggcgccagtccattcatg
gcaaccatggcgcagctgccatgtcacatgtacaacaagtcggattcgccccagtaccat
tcgtccagtctgctgtcacaagccatggtcatcactgacagcagcagcctggggaccctg
accagcctcgctgccgtcagacagattctaacagcagatcctgaggaacagacggaccca
cctttacaggaggattctctgcatctgcagccaaacacacctgtgccagcatcttctgag
agcttggagctgtaccctgcctctcagacgacagacagccatcagtcccacctcctctcg
ccttcaccaacagatatcagctcctacattcctacacaaatggtctcgactgcacagtag
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