Seriola dumerili (greater amberjack): 111230125
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Entry
111230125 CDS
T05606
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111230125 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111230125 (prpf3)
Spliceosome [BR:
sdu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111230125 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
111230125
NCBI-ProteinID:
XP_022612439
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRSARGNKGAGEKNRKRDLKDVFGDEADTGAMRETQEPGDGTVAKRKR
VPRFEEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATRQIEERKKQLSFASSVPAAPRLP
LPTPQSQMESSPVSRLLGTSTAAAAGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQ
LAMKPGILGALGNTGPHNLVALANLHAMGIAPPKVEAKEVNKPTPLILDEKGRTVDASGK
EVELTHRMPTLKANIRAVKREQFRQQLKEKPGEELESTSYFDQRVFITPAQRPRRSFKFH
DQGRFEKIAQRIRTKAQLERLQCEIAQAAKKTGIQASTKLALIAPKKEVGEGEVPNIEWW
DSYILPSNIDITEDTKFEKLELFGVTNLVEHPAQIQPPVDTDKPVTLGVYLTKKEQKKLR
RQTRREGQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEEANAARKLTAEQRKEKKVKKLKEDITDGVYIAVYRIRNLQNPAKKFKVEANANQLYL
TGTVVLHKDVNLVVVEGGPKSQKKFKRLMLHRIKWEEHNSKRDDPDGDDDTKRNNKCWLI
WEGTAKERSFGDMKFKQCPTESMAREHFKKHGTEHYWDLALSQSVLDTTDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccaaagcgggaggtggaggagttaaggccatgggtggagcgcactgtgaag
aaagtgcttggtttctcagagcccactgtggtcactgcagctttgcactgtgttggaaag
ggactggacaaaaggaagaccatagaccagctgcgtcccttccttgatgactctgctgga
ggttttgtggagcgtctttttgaagcgctggaggaaagccgtagtgcccgtggcaacaaa
ggagcaggagaaaagaaccgcaagagagacttgaaggatgtgtttggtgatgaagctgac
acaggtgcaatgcgagaaactcaggagccaggagatggaacagtggcgaagcggaaacgg
gtgcctcgcttcgaggaggtggaggagcctgaggtcatacctggaccgccatctgagagc
cctggcatgcttacaaaaatgcagatcaaacagatgatggaggcagccacaagacagatc
gaagagaggaagaaacaactgagttttgcctcttcagtccctgctgcaccacggttgccc
cttcctacaccacagtcacaaatggaatcctctccagtatcgaggcttcttggcacctcc
actgctgcagctgctggtggtgcctcatccatcgccccctcccaggccgccagcttcatg
aatgatgctatcgagaaggcccgcaaggctgctgagctacaggcgcgcatccagtctcag
ttagccatgaaacctggtatcctcggagctttggggaacactgggcctcacaacctagtg
gcactagctaatctacatgccatgggaattgctccaccgaaagttgaagccaaggaggtg
aacaagccaacacctcttattctggatgagaagggaagaactgtggatgcaagtggcaaa
gaggttgaactcacacatcgcatgcccacactgaaagctaacattcgagcggttaagagg
gagcagttccgtcagcagctgaaggagaagcctggggaggagttggagtccacgtcctac
tttgaccagcgtgtgtttataacaccagctcaacggcctcgcagaagcttcaaattccat
gatcagggacgctttgaaaagattgcacagaggattagaactaaggcccagttggaaagg
ttgcagtgtgagattgcccaggcagcaaagaagacaggaatccaggcatccaccaaactg
gccctgattgctccgaagaaggaggttggagaaggggaggtgcccaacattgagtggtgg
gactcttacatcctgccctcaaacatagacataactgaggacacaaaatttgaaaagttg
gagctctttggtgtaaccaacctggtagaacatcctgcccaaatccaacctcctgttgac
acagataagccggtcacgctgggtgtatacctgacaaagaaagaacagaagaaactgaga
agacagacacgaagggagggccaaaaagaagtgcaagagaaggttcgcctaggactgatg
cctccaccagaacccaaagtacgcatctccaatctgatgagagtgctggggacggaggca
gttcaagacccaacaaaagtagaggcccatgtcagagcacagatggccaagagacaaaag
gctcatgaagaggccaacgccgctcgcaaacttacagcagagcagaggaaagagaaaaag
gtcaagaagttaaaagaagacatcactgatggtgtttacattgcagtgtacaggatccgt
aacctgcaaaatcctgctaagaagtttaaagtggaggctaatgccaaccagctgtacctg
acgggcacagtcgttttgcacaaagatgtcaaccttgttgtagtggagggaggccccaaa
tctcagaaaaagttcaagaggctgatgttgcacagaatcaaatgggaggaacacaacagt
aaaagggatgatccagatggtgatgacgatacaaagagaaacaacaagtgttggttgatt
tgggagggaacagctaaagagcgtagttttggggacatgaagttcaagcagtgcccaaca
gagagcatggccagagaacacttcaagaagcatggcacagaacactattgggacctagct
ctcagccagagtgtgctggacaccacagatgactga
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