Seriola dumerili (greater amberjack): 111230208
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Entry
111230208 CDS
T05606
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04020
Calcium signaling pathway
sdu04080
Neuroactive ligand-receptor interaction
sdu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111230208 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111230208 (grin2a)
04082 Neuroactive ligand signaling
111230208 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111230208 (grin2a)
Ion channels [BR:
sdu04040
]
Ligand-gated channels
Glutamate (ionotropic)
111230208 (grin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
111230208
NCBI-ProteinID:
XP_022612580
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
HPVSMQGMKWFGSMSLSSKRSKRRSRRSSSCSSSSNSVLLSLALLVVVTLITDPAAAQKQ
RSGGASEKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHM
CDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQ
FGASIQQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITL
DAVEEDSRSQIMLKKVQSPVVLLYCSKDEAVYILEEARSLGLTGFGYIWIVPSLTTGNPE
ITPEEFPSGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEYGDIPEAKTSCYGQMEK
TTKLPPSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVLNKDREWEKMGKLDNGSLTL
KYPVWPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTT
EAGGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKA
VMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVML
LLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGT
TSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTV
PNGSTERNIRKNYPAMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDAAVLNYMAGRDEGC
KLVTIGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKN
EVMSSQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSGTPGLLFSISR
GIWSCIHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNISNLGGSRMNSPKREFMHSAG
PMIMDMMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTL
NDANPNTVEVAVSADAVQTNAKPPRTLWKKSVDTLRSVPPGPPPMPDMLMPDPRMSMKTQ
RYLPEDTAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSVTSKYPRDCSEVELSYLKT
KQVSGGTNQTGRGGGGGGGGGGGGGGGEKIYTIDSDRELSLHSDPIHYRESRGLAADDLD
YPEIYSDHSDNFRKCEQPIIHLNSSPLHHTDSDLLPDPTYSKHYNVKEKNLSPHESIDRY
KQTHCRSCLSKVTASYPPAGPYTPTASAAASATRSPYNRCEACIHMANLYDISEDQLLTD
PLVSPTMHHQQQQQQPDEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLG
RPARSVSLKEKDRFLDSASDSHYANLFGMRPYSGRLFGTGSKSMLFNHNLEESKRSKSLY
PAHGSENPFLSHSLRDDTSSRLVHGRSSSDIYKQLAVASPAAVLGAAPIKTRNDANNLRS
SVKSTTSYCSRDGRIANDMYNKEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKKIPSL
ESDV
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
catcctgtctccatgcaggggatgaagtggtttggcagtatgtccctcagcagcaaaagg
agtaagaggaggagtagaaggagcagcagctgtagcagtagtagtaatagtgtgctgctc
tccttggctctcctggtggtggtgaccctcatcacggaccccgcggcggcgcaaaagcag
cgaagtggcggcgcctcggaaaaagtgccggtcctgaacattgctgtgatcctgggacgc
acgcgctacatctccgaccgggacatccgggcgctgtggagcaaggaggaccccatcgac
gtcaacgtggtcacactgctggtcaacgagaccgacccgaaaagcatcatcactcacatg
tgcgacctgatgtccgggaccaagatccacggcgtggtgtttggggatggcaccgaccag
gaggccattgcccagattttggattttatttcctcgcagacgcttatacccatcctcggc
atccatggagggtcgtccatgatcatggctgataaggatgtgaagtcgacattcttccag
ttcggcgcctccatccagcaggaggctctgctgatgctgaacattatggaggagtacgac
tggcacatcttctccatcgtcacgtcaaagttccctggctaccaggagttcatcaacatc
ctgaaaacgaccgtggacaacagttttgtaggctgggacctgcagaatatcatcactttg
gacgcagtggaggaagacagccggtctcagatcatgctcaagaaggtccagtcccccgtg
gtcctactctactgttccaaggacgaggcggtctacatcctggaggaggctcgctctctg
ggcctcaccgggtttggatacatctggattgtgccgtcactcaccactggcaacccggaa
ataacgccagaggagttcccatcgggaatgatttcagtgtcatacgacgactgggactac
ccgttggaggcgcgtgtccgtgatggtctggggatcataacgtcagcagcggcagccatg
ttggaggagtatggcgacatccccgaagccaaaacatcctgttacgggcagatggagaag
acgaccaagctgccacccagcgcgctacataagtacatgatgaatgtgacatgggatggc
agagacttgtcattcactgaagacggctaccaggaaaacccaaagctggtggtcattgtt
ctcaacaaggacagggagtgggagaagatgggaaaactggacaacggcagcctgacactg
aagtacccggtgtggccgcgcttcaactccttcggtgatgccgagcttgacgacaaccac
ctgtccattgtcactttagaggagaaacctttcgttatagtggaggacgtggagaggctc
accggaacatgcatgaggaactccgtcccctgcagaaagcatatcaaagacaacacaaca
gaggctggtgggacgtacatcaagaagtgctgcaaaggcttctgcatcgatattctgaag
aaaattgccaaatatgtaaagttcacctatgacctgtacctggtaaccaatggcaagcat
ggcaagaagattaacaatgtctggaatgggatggtgggagaggtggtctataagaaagcc
gtcatggccgtcggatctctgacgatcaatgaggagcgttctgaggtcatcgatttctcc
gtcccgttcgtggaaaccgggatcagcgtcatggtctcccgtagcaacggaaccgtctcc
ccgtcagccttcctcgagccattcagtgcatcagtgtgggtgatgatgtttgtgatgctc
ctactggtgactgcaatggctgttttcatgtttgagtacatcagtcctctgggctttaac
agaaacttggcacagggaaaagacccccacggcccttccttcaccatgggcaaggccgtg
tggctgctttggggtctggtcttcaacaactctgtgccagtgcaaaacccgaaaggcacc
accagtaagttcatagtgtctgtgtgggccttcttcgctgtcatcttcctggcctcctac
actgccaacctggccgccttcatgatccaggaggagtttgtcgaccaagtcaccgggctt
tctgacaacaagtttcagaacccgtatgcatactcgcctccgttccgcttcgggacggtt
ccaaatggatccacagagaggaacatcaggaagaactaccctgccatgcaccagtacatg
gtgaaatatcatcaaactggcgtccaggacgcactggtcagcctcaaaacaggtaaactg
gacgccttcatctatgatgctgcagtgttgaactacatggccggcagagatgaaggatgt
aagctggtgaccattggcagcgggtacatctttgctaccactggttacggcattgctctg
cagaaagggtcctactggaaacggcaggtggatctggctatcctggccatcatcggagat
ggtgaaatggaggaactagaagcccagtggctgacaggaatttgccacaatgagaagaac
gaggtgatgtccagtcagctggatgtggacaacatggctggggtcttctacatgctggcc
acagccatggggctctccctaatcaccttcgtctctgagcatctcttctactggaggctc
agatactgtttcactggggtctgctccggcacgccgggtcttcttttctccatcagtcgg
ggaatctggagttgcatccatggagtccacattgacatgaagaaaaaaacagatctggac
tttagccctcaggacaaaatgcttaagctcatcaagtcagccaaacagatgaccaacata
tctaacctgggtggctcgcgcatgaactcacccaaacgtgagttcatgcactcagctggc
ccgatgatcatggatatgatggcagagaagggcaacttcatctatgctgacaaccgaagc
tacgctcccaaagacatgatctatggggatacgggtgacctgcagtcgtaccttgctaac
cgccacaaagaccaccttaacaactacatcttccagggaggccagcatcctctgaccctg
aatgatgccaatcccaacacagtagaggtggcagtgagcgctgacgcagtccagaccaat
gccaagccgccccggaccctgtggaagaagtcagtggacacgctccgttcagtgccacct
gggccccctccgatgcccgacatgctgatgccagacccacgtatgtcgatgaagacacag
cgctacctccctgaggacacagcccactctgacatctccgactgctccagcagggcagcc
tcctacaaggacccagaaaacaacaagcacctgaagcccaaggacaacttaaaaaaaaga
tcggtgacgtcaaaatacccaagggactgcagtgaggtggagctgtcctacttaaagact
aagcaggtcagcggcggaaccaaccaaaccggtagagggggaggaggaggaggaggaggg
ggaggaggaggaggaggaggagagaaaatctacaccatcgactcagaccgagagctgagc
ctgcactcagaccccattcactaccgcgagagtcgtggcctcgctgcagacgatttggat
taccctgagatctactctgaccacagcgacaactttaggaagtgtgagcagcccatcatt
catctgaattcctcgcctttgcatcacacagactcagatcttctaccagacccaacttac
tctaaacactacaacgtgaaagagaaaaacctgtccccacatgaatccattgatcgctac
aaacagacacactgccgttcctgcttgtccaaagtgaccgctagctacccaccagcaggg
ccgtacacgcctactgcctctgccgcagcttctgccacacgctcaccctataatcggtgt
gaagcatgcatccacatggccaacctgtatgacattagtgaggaccagctcctcacagac
cccttggtcagtcccaccatgcaccaccaacagcagcagcagcaaccagacgaaatgttt
ggtctgtattggccacagacggatgggccacatgtccaaaagagaaaccgcttgaggctc
agtcgtcagcattcctttgacaacatcatgctagaaaagcccaaggatgtagacctgggc
cgaccggcgcgtagcgtcagcctcaaggagaaggaccgcttcctggactccgcatctgac
tcgcattatgcgaacctcttcggcatgcgtccctactccggaagactgtttggcaccggc
tccaaatcaatgctgtttaaccacaacctggaggagagcaagaggagcaagtccctgtac
ccggcccatggctcggaaaaccctttcctcagccactcgctgagggatgacaccagcagc
agactggtccatgggcgtagctcctctgatatttacaaacagctggcggtggcttcacct
gcagcggtccttggagcggcccccatcaaaacacgcaacgatgcgaacaatctccgctct
tccgttaaatccaccacttcatactgctcacgggacgggcggatagctaatgacatgtac
aataaagagcatgtgatgccttactcagccaataagactagtgcatacccggccccacgc
ggtgtcctaaactcagcccagttcagcaatagacgggtctataaaaaaatccccagtctg
gagtcagatgtttag
DBGET
integrated database retrieval system
