Seriola dumerili (greater amberjack): 111230243
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Entry
111230243 CDS
T05606
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdu01001
]
111230243 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sdu04054
]
111230243 (ciita)
Enzymes [BR:
sdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111230243 (ciita)
Protein kinases [BR:
sdu01001
]
Serine/threonine kinases: Other
TAF1 family
111230243 (ciita)
Pattern recognition receptors [BR:
sdu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111230243 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
AAA_16
LRR_8
AAA_22
nSTAND3
NPHP3_N
AAA
nSTAND_NTPase5
DUF815
TsaE
NB-ARC
Motif
Other DBs
NCBI-GeneID:
111230243
NCBI-ProteinID:
XP_022612632
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MHEVDQDQFITLELGDLPDDLSEFMKDDYLPLIDTDVLFGDVWLNGEDSNNFSDVALPTE
LPCTGSHQQRQKNKVTGKTNSGRKRKRATTILKSTRAQRRTDENTPSKPKKRRAADKPQG
TDEQHEPAVTQSTDTGLEQNPAEAAGLTTTPPRILHLHPPIQFIFPDSGYVQTLRLSPPV
IGLPLLLPLLVPAASTPCKRQVQPPSPVDGAVAPVQMSSSPPGSMSDTASKAMPPLCNSP
GSPSNEMSPCKEPPLPQSPTVLDIPQVVQDYIQKVKAHMSQTCQDMEEGLTLSSHYVDMQ
VSRREILRSGKSANKCLDKELINMGDTDRQKSLLRQSQIFEGSNGDKSKHCILLLGNAGM
GKTTLIRKLCLDWSIDCIPQFDFVFLLDGKALTLTKPTFSLQTLLLNLSSFAPSCMDPEA
VYAQILAAPKRVLIVFDGFDQLRDYESLLQTQEKDLIASLQKDSKAQTYTVRQLYSAILQ
RVLLPGCTLLLATRPRGTASQLLRRADSFLEVCGFSPTDVETYLSQYFTDPALRASALDW
LKNCTYLHLLCWNPGLCRLVCLVLEQSKSLEDLPRTLTGLCHQVLRLKMDKDNRSTHSQA
EDPTQISLQAEDPTQISLQAEEETQTQISSNIQTKRCHKNTHKRSRVQVRTRSRTQRTRR
AKEKEEEENEVDGEEMNSGGREADRTEERELLSQLSSLAWEGVKANSSILPTGRTLSDKL
KAFGLRMRLFLSHPLRTRLVVLSGEGKEGGTQDKDEVGGGEKGDRKGNRVGTEINNVDAN
DDYIVLWANPFLQSYLAGVHLSLSRTLSDRNFLQTLPFQSGPKGRRRPQREELELTQRFT
VGLLFHKRTELQRLHSNTETSFRNMVVNKQALVTKHLEGLSHGDLSPAQVLEACHYVYEA
NFTHSDGSGGTGSSRLVTHLAANLPEVLTFHGVPLNPPDVFTLQNVLERGGTEGRSFCLD
LEDSGIQVSGLRALVGLKSINTYRACIADVITLWEQLEQSGEEGLLRGAVSKLNIHPLKA
TQVCHVEHLAKLVNIHMHKRLTDSCSQSDSILAEGVPAVKELHKLEFELGPEKGPLGLPK
LWELLPGLQNLQHLDLENSKIGDKGAEKLADALASLCSLEILNLSQNCIGDNGVKKLAST
LSDLPKLHCLSLYSNVISDEGAESLAAVLPHMASLTELDVKYNKLTDVGAQSLGASLRKC
QKIKTLRMWNQCIPYGVFERLQQQDSRILWH
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtagatcaggaccaatttatcaccttagagctcggagatctgccagacgat
ttatctgaattcatgaaagatgattacctgccgttgatcgacacagatgtgctcttcggc
gatgtgtggttgaatggagaggactccaacaacttcagtgatgttgctttgccaacagag
ctgccgtgcacaggcagccaccagcagagacaaaagaacaaagtaacgggcaaaacaaac
agtgggagaaaaagaaagagagctacgacgatcctcaagtctacccgggcacagcggcgc
actgatgagaacacaccatccaaaccaaagaaacgaagagctgcagataaaccgcaaggg
acagatgaacagcatgagccagctgtcactcagagcactgacacaggattagagcaaaat
cctgctgaggcagcaggccttaccaccactccaccaaggatccttcacctccatcccccc
attcagtttatcttcccagattcaggatatgttcagactctgaggctctctcctccagtt
attggtcttccactcctgcttccattattagttcctgctgcctcaacgccttgcaaacgt
caagtgcaaccaccctccccggtggacggtgcagtagccccagttcaaatgagttcatcg
ccaccgggatccatgtcagacactgctagcaaagccatgcctcccctttgtaactcacct
ggctcccccagtaatgagatgtccccatgtaaagaaccacctctacctcagtcccccact
gtccttgatattccacaggttgtccaggactacattcagaaagtcaaagcccacatgagc
caaacttgccaggatatggaggagggccttaccctcagctctcattatgtagatatgcaa
gtgagccggagagagattcttcgctctggaaaaagtgcaaacaaatgcctggataaggag
ctcatcaacatgggagatacagatcggcaaaaaagcttgttgaggcagagtcagatcttc
gaaggctcaaatggagataaatccaaacactgcatattgctacttggaaatgcgggcatg
ggaaaaaccaccctgatcaggaagctgtgtcttgactggtccatagactgcatcccacag
tttgactttgtcttcttattagacggcaaagcgctcactttaaccaagccgacctttagc
cttcagaccctcctgttaaacctttcctcttttgccccttcctgcatggaccccgaggca
gtgtacgctcaaatccttgcagccccgaagcgtgtgctcattgtttttgatgggtttgat
cagttacgggactacgaaagtctactccagactcaagaaaaagacttgatagcatcgttg
cagaaagacagtaaagcacagacctacacagtaagacagttatactctgccatccttcag
agggtgcttcttccaggatgcacgcttctcctcgctacacggccaagaggcactgccagc
cagcttctgcggcgggcggacagctttctggaggtatgtggcttttctcccacagatgta
gagacatatttgtcccagtacttcaccgatcctgccctcagagcgtctgctttggactgg
ttaaaaaactgcacttatctacatctcctctgctggaaccctggactatgtcggctggtg
tgcttggttttggagcagtccaaaagtttggaggacctaccgagaactttaaccgggctc
tgccatcaagtgcttcgtttgaaaatggacaaggacaataggagcacacattcgcaggct
gaagatccaacacaaatatctttgcaggctgaagatccaacacaaatatctttgcaggct
gaagaagaaacccagacacaaatctcaagtaatattcaaacaaaaaggtgtcacaaaaat
actcacaagaggtccagagtacaggttcgcactcgctctcgtacccaaagaacaaggagg
gcaaaagagaaggaggaggaggaaaatgaagtggatggagaggagatgaacagtggtgga
agggaggcagataggacagaggagagagagttgctgtcccagctgagctctttggcctgg
gagggggtcaaagccaactcgtccatccttcccacaggacgaacgttatctgacaaactc
aaagctttcggcctcagaatgaggctcttcctctctcaccccctgaggacaagactggtt
gtgttaagtggtgaagggaaggaaggaggaacacaggacaaggacgaagtgggaggagga
gagaaaggagacaggaagggaaacagagttgggacggaaattaacaacgttgatgccaat
gatgattacatcgtgttgtgggccaaccctttccttcagagttacttggcaggtgtccat
ctgtctttgtcgaggactttgtcagaccgaaatttcctccagactctccctttccagtca
ggcccgaagggacgtcgacgacctcaacgagaggagctcgagctcactcagcgatttaca
gttggcctccttttccacaaaagaacagagctgcagaggcttcactcaaacacagagaca
tcctttagaaacatggtggtcaacaagcaggctttagttacaaaacaccttgaaggtctt
tctcatggtgacctgagtccagcccaggtcctggaggcatgtcattatgtttatgaagcg
aatttcacgcacagcgatggaagcggaggcactggcagctcacgattggtcactcacctg
gcggcgaatctcccagaagtcctgacatttcatggagttccactcaacccaccggatgtc
ttcaccctgcagaatgttctggaaaggggtggaactgaagggagaagtttctgcttggat
ctggaggattctgggatacaggtttctggactgagggcactggtggggctcaagagcatc
aacacatacagggcatgcattgctgatgttatcaccctgtgggagcagctggagcagagt
ggtgaggaggggctcctacgaggggcggtgtccaagttaaatatccaccctctgaaagcc
acgcaggtctgtcatgtggagcacctggcaaagctggtgaacatacatatgcacaagagg
ctgacggacagttgcagccaatcagattccatcctggcagagggagtgccagcagtcaaa
gagctacacaagctggagtttgagcttggtccagagaaaggtccactgggtcttcccaaa
ctgtgggagctcctgccaggtctacagaaccttcagcacctagatctagagaacagtaag
ataggggacaaaggtgcagagaagctggctgatgcgttagcctcactctgttccctggag
attctcaatctgtcacagaattgtattggagacaacggggtgaagaaactggcgtccacg
ctgagtgatctgcccaagctgcactgtttgagtctctacagtaatgtgatttctgacgaa
ggggcagagagtttagcagccgtcctcccacacatggcgtctctcacagagctagatgtg
aagtataacaagctgacagatgtcggagcccagagccttggagccagtctgagaaaatgt
caaaagataaagactttaaggatgtggaaccagtgtattccatacggagtgtttgagcgt
cttcagcagcaggacagtcggatcctttggcattag
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integrated database retrieval system
