Seriola dumerili (greater amberjack): 111230306
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Entry
111230306 CDS
T05606
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
sdu03015
mRNA surveillance pathway
sdu03040
Spliceosome
sdu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111230306 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
111230306 (alyref)
03015 mRNA surveillance pathway
111230306 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111230306 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111230306 (alyref)
03041 Spliceosome [BR:
sdu03041
]
111230306 (alyref)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111230306 (alyref)
TREX complex
111230306 (alyref)
Spliceosome [BR:
sdu03041
]
Complex C
Other components
EJC/TREX
111230306 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111230306 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
111230306
NCBI-ProteinID:
XP_022612717
UniProt:
A0A3B4UV89
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MTDKMDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGGRGGGAGRLGVGGGGFGVRGGGSG
PMRNRQNLNRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIP
LDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRNRGGGFGGMQRGRGGRGAGGARGKGR
GGGGRGGSSKQQLSAEELDAQLDAYNARMDTS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaaatggatatgtctctagacgacattatcaagcagaacaggcagcagaga
ggtggaggccgcggtggaagaggtcgaggccgcggaggctcaggcggtggcagaggagga
ggcgctgggcgtcttggagtcggcggcggaggatttggagtccgaggcggcggatccggc
cccatgaggaaccgacagaacctgaaccgcgctagaggcagaccaacgccttacagcagg
cctaaacagcttccagataagtggcagcatgacatgttcgacaatggcttcagcggcttc
aatggcgctgctggtggtggcggaggagctggtgtggaaactggagggaagctcctcgtc
tccaatctcgactttggagtctcagatgcagacattcaggaactttttgctgaatttggg
actctgaaaaaggctgcagttcattatgaccgatcaggaagaagcctgggaaccgcagat
gtccactttgaaaggagggcagatgccctcaaggccatgaaacagtacaatggcatccca
cttgatgggcggcctatgaacatacagctcgtcacatcacagattgacacacagaggcga
cctatgcagggtctgaacagaggtggtggaggcatgaacagaaatcgtggcggcggcttt
gggggcatgcagagaggccgcggaggacgtggtgcaggcggtgccagaggaaagggtcga
ggcggaggcggccgtggtggtagcagcaagcagcagctgtcagcagaggaacttgacgcc
cagttagatgcctataatgccaggatggacaccagctaa
DBGET
integrated database retrieval system