Seriola dumerili (greater amberjack): 111230311
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Entry
111230311 CDS
T05606
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111230311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111230311
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111230311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
CDC45
Nop14
SDA1_dom
CPSF100_C
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
111230311
NCBI-ProteinID:
XP_022612720
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MATDIVAQLADSLAQTGVEEGELSYKGQGRKLNDAQSVEEMVKEIQDFEGLKALRLEGNT
VGVEAAQAIAKALETKSEFKRCYWSDMFTGRLRSEIPPALNSLGDALMLAGARLTVLDLS
DNAFGPDGVKGIENLLRSTACYTLQELRLNNCGMGIGGGKILAASLIQCHKKSSAESTPL
SLRVFVAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINHPGVTALATAMQHNTGLRI
LNLNDNTFTERGAIAMAQALKHLRSIQVINFGDCLVRPAGAKAIAETVSEGLPILKELNL
SFGEITEDAALAVAQAVKDKDQLEKLDLNGNCLGDDGCKALKDAMEGMNMAELLGSLSDD
EGEPEDDDEDEDEDEEEDDEEEDVDEEEIEEEEEEEEEVESNGNKLSTPASAPRPPDVSS
FLSFPSPDKLLKLGAKRALLIEQQVDVTDAAKTAEAFLKIASVYKEENNDIKNAVLDSID
ALLKKAFTTPSFQGYSFVSSLLVLLGLIKSEDKVKPVLVVPGHLHALEHVVRQDYFPKES
VAVLEAFMSRNNKAMESCGNAKRGLQSTLQRVQSES
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatattgttgcgcagttggccgactctctggcccagacaggagtagaggaa
ggagagctgagctacaaaggccagggaagaaagctgaatgatgcccagtcagtggaggag
atggtgaaggagatccaggactttgagggtttaaaggctctgaggttggaggggaacact
gtcggtgtggaggcagcacaggccatcgccaaggccctagagactaagagcgagttcaag
cgctgttattggagtgacatgttcacaggtcgcctgcgctctgagatcccacctgccctg
aattcactgggtgatgctctgatgctggcaggtgccaggctgaccgttttagacctcagt
gacaacgccttcggaccagacggggtgaagggcatcgagaacttgctcaggagcaccgcc
tgctacacactgcaggagctgcggctcaacaactgtggcatgggcatcggaggggggaag
atcttggctgcctcgttgatccagtgtcataaaaaatccagtgcagagagcacccccctc
agcctgagggtgtttgttgcagggaggaaccgactggagaacgatggagccactgccctc
gctcaagctttccagttgatgggcagcctggaagaggttcacatgccccagaatggcatc
aatcaccccggtgtgacagccctggccacagccatgcagcacaacacaggactccgcatc
ctcaacctcaacgacaacaccttcactgagaggggggcgatcgccatggctcaggctctg
aaacacctccgcagcatccaggtgataaacttcggagactgtctggtgcggccagcagga
gccaaagctatagcggaaactgtatcagagggactcccaatcctcaaggaactcaatctg
tcattcggcgagatcacagaggacgctgctctggctgtggcacaagcagtaaaggacaaa
gaccagctggagaaactggacctaaatggtaactgtctaggagacgacggctgcaaagct
ctgaaagacgccatggaaggcatgaacatggccgagcttctaggatcactcagtgatgac
gagggtgaaccagaggatgacgacgaggacgaggacgaagatgaagaggaggatgacgag
gaggaggatgtggatgaggaggaaatagaggaggaagaggaagaagaggaggaagtggaa
agcaatggcaacaagttgtccaccccggcatcagcaccgcggccaccagatgtctcctcc
ttcctcagctttccgtcccctgacaaactgctcaagctcggggcaaagagagctttgctg
attgagcagcaggtggatgtaacagatgctgcaaaaacagctgaagccttcctcaagatt
gcatcagtgtacaaggaggagaataatgatattaagaatgcagtgttggacagtatcgat
gctcttctgaagaaagctttcaccactccttccttccaaggctacagctttgtatcatcc
ttgttagtgctgcttggacttatcaagagtgaggacaaggtgaagcctgtgctcgttgtt
cccggtcacctccacgcgttggagcacgtcgttcgacaggactacttccccaaagagagc
gtggctgtgctggaggccttcatgtcccgaaacaacaaggccatggagtcatgtggcaat
gccaaaagaggcctccaatccacactgcagagagtccaatctgagagctga
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