Seriola dumerili (greater amberjack): 111230501
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Entry
111230501 CDS
T05606
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03040
Spliceosome
sdu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111230501
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111230501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111230501
Spliceosome [BR:
sdu03041
]
Common components
Common spliceosomal components
SR proteins
111230501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111230501
NCBI-ProteinID:
XP_022612975
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDY
MRQAGEVTYADTHKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGARRSR
RSYSRSRSRSRSRSRSRRSRKSRSRSESSSRSRSHSRAASRSRSRSRSKKNKGKSKKEEE
ERSNGAQKSKDRSRSRSPKSKKIKKEGKKGKKDDSRSRSRSRSRSRSRSGIKDRSRKSGS
KGREQPKSDDEGGEPERGSRSRSRSPAESKSRARSKSKSKSKSRSPSPAKARSHSRSASR
SESRSKSRSQSRSRSRSRS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggtgtatatcggaaggctgagctacagagccagagaaaaggacgtggagagg
ttctttaaaggctacgggaagattctggaagtcgacctgaagaacgggtatgggtttgtt
gagtttgatgacccccgtgacgcagacgacgctgtgtatgacctgaacggcaaagagttg
tgtggagaacgggtcattgtggaacacaccaagggacctcgtcgtgatggaggctatggt
ggacggagtggatatgggcgctggggaagagacagatatggtccacctataaggacagat
tatcggctcattgttgagaatctttccagccgctgcagctggcaggacttgaaggactac
atgagacaggcaggggaggtgacttatgctgacacccacaaaggccggaggaacgagggg
gtgattgagttcaggctctactctgacatgaagagagctctggagaagctggacggcaca
gaggtgaacggcagaaagatccggctcatcgaggatcgacctggagccagacgcagccgc
cgctcttattctcgcagtcgcagccgctccaggtctcgctccaggagccgcaggtctcgc
aagagccgcagccgcagtgagagcagcagccgcagccgctcccactccagggcggcgtct
cgctcccgcagccgatctcgtagcaagaagaacaagggcaagagcaagaaggaggaggag
gagcgcagcaacggcgcccagaagagcaaagaccgcagcaggagccgcagccccaagagc
aaaaagatcaagaaagaagggaagaagggcaagaaggacgactccaggtccaggtctcgc
tctcgctccaggtctcgttctagatcagggattaaggatcgctccaggaagtctggctca
aagggccgcgagcagccaaagagtgacgacgagggaggcgagccagagaggggctctcgc
tctcgctcccgcagccccgctgagtccaaatccagagccaggtctaaatccaagtccaaa
tccaaatcccgttccccttcacctgccaaagcccgctcccactccaggtctgcctcacgg
tcagagtcccgttccaaatcccgctcccagtctcgttctcgctctcgttcccgctcctag
DBGET
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