Seriola dumerili (greater amberjack): 111230554
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Entry
111230554 CDS
T05606
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111230554 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111230554 (ube3b)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111230554 (ube3b)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
HECT type E3
111230554 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
111230554
NCBI-ProteinID:
XP_022613050
UniProt:
A0A3B4UIG8
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MFGVPQSSKSEFLDKARQAREERKGQKDKEKAAINIQALVRRFLCRCRLQKQIRKEVDDY
FHASETGTSKRNALSIFRIARKLLFIYRQEDKMRFEKLCRAILASMEVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWTCCQLLKNLKPDILQDNKLVTLYLTVLVTFTDTSTWRIIRGK
GEALRPALMRICENIMGHLNQKGFYSILQILLTNGLARSKPSLSKGTLTAIFTLSLRPVI
AAHFSDNLLRSFLIHIMSVPAVVYHLNVLTPECMASIQTHDLLRKFILFLSREEQCSDIC
VCLEGSHTLCLLGNLIHLGYLNEKVLEEEASHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQYLWGVSVIRTLFSDVLSKKLESQEPTPPPPQPSTS
QNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALSTLTQIRLQ
ILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLSMLMLFCDCSRHLI
TILDDIEVYEEQTSFKIEELITISSFLNTFVYKMIWDGILENAKGEKLELFHSVHGWLMV
LYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRNI
VTKEKENLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDV
GDLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFI
RGFRSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDIL
SSDFNAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgtgcctcagagctccaagtccgagttcctggacaaagcccggcaggccagg
gaggagaggaaggggcagaaggacaaggagaaggcagcaatcaacatccaagctctggtc
aggagatttctctgtcgctgcagactccagaagcaaataaggaaagaggttgatgactat
tttcatgcctctgaaactgggacgtcaaaaagaaatgcactttcaattttcagaattgct
cggaaattactgttcatatatcgccaagaggataagatgaggttcgagaagctttgtcgt
gctattcttgccagcatggaggttgaaaatgagcctaaagtctggtatgtctccttggct
ctctccaaagacctcactattccctggctcaagcagataaaagatgtactgtggacttgc
tgtcagctactgaaaaatttaaagcctgacatacttcaggacaataaattggtaactctg
tacctcactgtgctggtgaccttcacggacacttcaacctggcggataatccgagggaag
ggagaagctctcagacctgcattgatgaggatctgtgaaaatatcatgggccatctcaat
caaaagggattctattcaatactccagatcttgctgaccaatggcttggctcgttctaaa
ccatctctgtccaaaggcactctaacagctattttcactttgtcattaaggcctgtcatc
gctgctcacttctccgataacctgctaagatcattcctcatccacatcatgtccgttcca
gctgttgtataccacctcaatgtgctcactccagagtgtatggcgtccattcagacgcat
gacctcctgcggaagttcatcttgtttctcagccgggaagaacagtgttcggacatctgt
gtctgtcttgaggggagccacacactctgcttacttggcaacctgattcacttgggttac
cttaatgagaaagtccttgaagaggaggccagtcattttgtgaaggacctgactgacatg
ctgtcctactgccagagatatgtatcccaaaagaagtctaaccttacccactggcatcct
gtcctgggatggttctcacaaacagtggactacggcctgaatgagtcaatgccgctggtc
accaagcagcttcagtacctgtggggtgtttctgtcattcgaacgctcttcagtgacgtc
ctctctaaaaagctggagagccaggagcccactcccccacctccacagcctagcacatca
caaaacaatctaccagttaaaaacctcttcaagcgagcatttcagaagtcggcttctgtg
agaaacatcctgaaaccagtaggggggaaacgagtcgactctgctgaagttcagaaggtg
tgcagcatctgtgtgctctaccagacagctctgtctacgctgacacaaatacgcctccag
atcctcactggtctgacacatcttgatgatcttttgcccaaactttgggccttcatctgt
gagcttggtcctcagggaggccttaaactcttcatggagtgtctgaacaatgacactgaa
gagtccaagcagctcctgtctatgcttatgcttttctgcgactgctcacggcacctaatc
acaattctggatgacattgaagtctatgaggaacaaacatctttcaagatagaggaactc
atcactatctcctcatttctgaacacatttgtgtacaagatgatatgggatggcatctta
gaaaatgctaagggagagaaactggagttgttccacagtgttcatggttggctcatggtg
ctttatgagcgagactgcaggcgaaggttcacccctgatgaccactggctacgcaaggac
ctgaagcccagtctgttgttccaagagctggagaaaggaaagaaaagagcccagctttta
ctgcagtacatcccacacgtcattccacataaaaacagggtgctgctgttcaggaacatc
gttacaaaggaaaaagaaaatttaggattggtagaaacaagctctgcttcaccacatgtc
acccatattaccattcgtcgctcacggatgttggaggatggatatgaccagctccgtcgg
ctgccagtgaattctataaaaggcgtcattcgtgtgaagtttgttaatgacctgggagtg
gacgaggctggtatcgaccaggatggtgtcttcaaagagttcctagaggagatcattaag
aaagtgttcaatcctgctctcaacctcttcaagactaccagtggaaatgaaaggctgtat
ccttcacccacctcttacatccatgagaaccatttgcagctgtttgagtttgtggggaag
atgcttgggaaagctgtctacgaaggcatcgttgtggacgtcccgtttgcctccttcttc
ctcagtcaagtcttgggtcaccaccacagcactttctacagctccatcgacgagcttcct
tcactggactctgagttttacaagaacctcacgtccatcaagcggtacgatggagatgta
ggggatctaggactgacgttatcctatgatgaggatgtcatggggcagcttgtctgtcat
gagctgatacctggggggaaaaccatgccagtcaccaatgaaaacaagatcagctacatc
cacctcatggctcacttccggatgcacacgcagattaaggagcaaactgcagctttcatt
cgaggcttccgcagcatcattaacccagagtggctgcacatgttttccacacctgaggtt
cagcgccttgtctcaggagacaatgctgagattgatctagatgacctcaagaaacacaca
gtctactatggaggatttcacagcagccatcgtgtcatcatctggctgtgggatatcctg
tccagtgacttcaatgctgaagagagggctatgttccttaaatttgttaccagctgttca
aggccacctcttctaggtttcgcctacctcaaaccacctttctccatccgttgtgtggaa
gtttcagatgatcaggacaccggagacaccctcggcagtgttctgaggggctttttcact
atccgcaagaaggaacccggtggtcgacttcccacttcatcaacctgcttcaacctgctc
aagctgcccaactacagcaagaagagcatcctgcgtgacaagctgcgttacgctatcagt
atgaacacaggctttgagctctcctaa
DBGET
integrated database retrieval system
