KEGG   Seriola dumerili (greater amberjack): 111230596
Entry
111230596         CDS       T05606                                 
Name
(RefSeq) ribonuclease ZC3H12A-like
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111230596
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     111230596
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 zf-CCCH
Other DBs
NCBI-GeneID: 111230596
NCBI-ProteinID: XP_022613105
LinkDB
Position
Unknown
AA seq 638 aa
MKTVVVFPSVHPWSKFTTSTCLNSPAWIFHPLQTSPRPSCENMYPGDPEPTLDPQDLEMD
FFHKLGYSTAQVQAVQQTFGPKMDTDKVLGELVRIGARRDAKPGPVTTMSVLVPRGDVQA
AGPTLQLPVTAAAPSSSEDNSEDEDALRPVVIDGSNVAMSHGNKEVFSCLGIQLSVNFFL
DRGHTDVTVFVPSWRKEQPRPDAPITDQHILRDLERKKILVFTPSRRFAGKRVVCNDDLF
IVKLAYDTDGIIVSNDMYRDLQGEKPEWKRFIEERLLMYSFVNNKFMPPDDPLGRHGPTL
ENFLRRFPKTQKKQQCPYGKKCTYGVKCKFHHPERAKQSSRSVADELRENTKHPSPAQKQ
PSARSSPQPGQSLLLVEDMAKKLTLGHESGSVKKDHKHEHVAQVKPSQRSSRRTTSRKEK
PSQHSSCNHSSGQGGGSQEQLDSGLGSIDSQLKEAAWNQCDHQYRPTFRSCQRNHSARPQ
YCPPTSAPCSCCSHGPPLPAFQHHNQPHSIEPVSSLSPDMVPYGPPQYQGYGLYPLSVPA
YSQPTDFQHSRVHECQQQMFWSDPFGGRRPAVRSQPGERSQWEPSPSREEREVVRKKLLA
IFSAHLVDTAMDMFPHMMDPQMLVAEILMLQGQNRSLR
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgaaaactgttgttgtttttccttctgttcacccctggagtaaattcaccacctcaact
tgtctgaactctcctgcatggatctttcatccacttcaaacctccccccgtccttcctgt
gagaacatgtaccctggtgaccctgaacccaccctggatccccaggacctggagatggac
ttcttccacaagctgggttactccacggctcaggttcaggccgtccagcagacgttcggc
cccaaaatggacacagataaggttctgggggagctggtgaggattggggcccgtcgggat
gccaagccggggccggtgaccacaatgtcagtgctggttcccagaggggacgtccaggcc
gcaggcccaaccctgcagcttcctgttactgcagcggctccttcgagcagtgaggacaac
agtgaggatgaagacgctctgagacccgtggtaatagacggcagcaacgtggccatgagc
cacgggaacaaggaagtgttctcgtgtctgggaatccagctgagtgtgaacttcttcctg
gaccgaggccacactgacgtcactgtgtttgttccctcgtggaggaaggagcagcctcgg
ccggatgctcccatcacagatcagcacattctgcgagacctggagaggaagaagatcctg
gtcttcacaccgtcacggcgcttcgcaggtaaacgtgtggtctgtaatgacgacctcttc
attgtgaaactggcctacgacactgacggtatcatcgtgtccaacgacatgtaccgagac
cttcagggagagaagccggagtggaaacgcttcattgaggagaggctgctcatgtactcc
tttgttaacaacaagtttatgcctcctgacgatcctctgggtcgacatggaccgaccttg
gagaacttcctgcggaggtttcccaagactcagaagaaacagcagtgtccttatggaaag
aaatgtacgtatggagtcaaatgtaaattccaccaccctgaacgagccaaacagtcgagt
cgctcagtagctgacgagcttcgtgaaaacaccaaacacccttcacctgctcagaaacaa
ccttcagctcgctccagtcctcagcccggacagagcctcctgctggtggaggacatggcc
aagaaactgactctgggacatgagagcggctccgtgaagaaggatcataaacatgaacat
gtagctcaggtgaagccaagtcagcgctccagcaggaggaccacatcgaggaaggagaag
cccagccagcactcgtcctgtaaccacagctccgggcagggtggcggctctcaggagcag
ctggactcgggtctaggctccatagacagtcagctaaaggaggctgcgtggaaccagtgt
gatcatcagtacaggccgacgttcaggagctgccagcggaaccacagtgcccgaccccag
tactgccccccaacaagcgccccctgcagctgctgctcacatggtcctcctttaccagct
ttccagcaccacaaccagcctcacagcatcgagccggtcagcagcctcagccctgacatg
gtcccctacggcccccctcagtaccagggctacgggctgtacccgctcagtgtgcctgcc
tacagccagccgacagacttccagcacagcagagtccacgaatgccagcagcagatgttc
tggtcggatccgttcggggggcgacgtccagcagtccgcagccagccgggggagcgctca
cagtgggaaccgagtcccagcagggaggagagagaggtggtccgaaagaagctcctcgcc
atcttcagtgcacacctggtcgacacggccatggacatgtttcctcacatgatggatcca
cagatgctcgtcgctgagatcctcatgctgcagggtcagaaccggtctctgagatga

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