Seriola dumerili (greater amberjack): 111230596
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Entry
111230596 CDS
T05606
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111230596
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111230596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
111230596
NCBI-ProteinID:
XP_022613105
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MKTVVVFPSVHPWSKFTTSTCLNSPAWIFHPLQTSPRPSCENMYPGDPEPTLDPQDLEMD
FFHKLGYSTAQVQAVQQTFGPKMDTDKVLGELVRIGARRDAKPGPVTTMSVLVPRGDVQA
AGPTLQLPVTAAAPSSSEDNSEDEDALRPVVIDGSNVAMSHGNKEVFSCLGIQLSVNFFL
DRGHTDVTVFVPSWRKEQPRPDAPITDQHILRDLERKKILVFTPSRRFAGKRVVCNDDLF
IVKLAYDTDGIIVSNDMYRDLQGEKPEWKRFIEERLLMYSFVNNKFMPPDDPLGRHGPTL
ENFLRRFPKTQKKQQCPYGKKCTYGVKCKFHHPERAKQSSRSVADELRENTKHPSPAQKQ
PSARSSPQPGQSLLLVEDMAKKLTLGHESGSVKKDHKHEHVAQVKPSQRSSRRTTSRKEK
PSQHSSCNHSSGQGGGSQEQLDSGLGSIDSQLKEAAWNQCDHQYRPTFRSCQRNHSARPQ
YCPPTSAPCSCCSHGPPLPAFQHHNQPHSIEPVSSLSPDMVPYGPPQYQGYGLYPLSVPA
YSQPTDFQHSRVHECQQQMFWSDPFGGRRPAVRSQPGERSQWEPSPSREEREVVRKKLLA
IFSAHLVDTAMDMFPHMMDPQMLVAEILMLQGQNRSLR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgttgttgtttttccttctgttcacccctggagtaaattcaccacctcaact
tgtctgaactctcctgcatggatctttcatccacttcaaacctccccccgtccttcctgt
gagaacatgtaccctggtgaccctgaacccaccctggatccccaggacctggagatggac
ttcttccacaagctgggttactccacggctcaggttcaggccgtccagcagacgttcggc
cccaaaatggacacagataaggttctgggggagctggtgaggattggggcccgtcgggat
gccaagccggggccggtgaccacaatgtcagtgctggttcccagaggggacgtccaggcc
gcaggcccaaccctgcagcttcctgttactgcagcggctccttcgagcagtgaggacaac
agtgaggatgaagacgctctgagacccgtggtaatagacggcagcaacgtggccatgagc
cacgggaacaaggaagtgttctcgtgtctgggaatccagctgagtgtgaacttcttcctg
gaccgaggccacactgacgtcactgtgtttgttccctcgtggaggaaggagcagcctcgg
ccggatgctcccatcacagatcagcacattctgcgagacctggagaggaagaagatcctg
gtcttcacaccgtcacggcgcttcgcaggtaaacgtgtggtctgtaatgacgacctcttc
attgtgaaactggcctacgacactgacggtatcatcgtgtccaacgacatgtaccgagac
cttcagggagagaagccggagtggaaacgcttcattgaggagaggctgctcatgtactcc
tttgttaacaacaagtttatgcctcctgacgatcctctgggtcgacatggaccgaccttg
gagaacttcctgcggaggtttcccaagactcagaagaaacagcagtgtccttatggaaag
aaatgtacgtatggagtcaaatgtaaattccaccaccctgaacgagccaaacagtcgagt
cgctcagtagctgacgagcttcgtgaaaacaccaaacacccttcacctgctcagaaacaa
ccttcagctcgctccagtcctcagcccggacagagcctcctgctggtggaggacatggcc
aagaaactgactctgggacatgagagcggctccgtgaagaaggatcataaacatgaacat
gtagctcaggtgaagccaagtcagcgctccagcaggaggaccacatcgaggaaggagaag
cccagccagcactcgtcctgtaaccacagctccgggcagggtggcggctctcaggagcag
ctggactcgggtctaggctccatagacagtcagctaaaggaggctgcgtggaaccagtgt
gatcatcagtacaggccgacgttcaggagctgccagcggaaccacagtgcccgaccccag
tactgccccccaacaagcgccccctgcagctgctgctcacatggtcctcctttaccagct
ttccagcaccacaaccagcctcacagcatcgagccggtcagcagcctcagccctgacatg
gtcccctacggcccccctcagtaccagggctacgggctgtacccgctcagtgtgcctgcc
tacagccagccgacagacttccagcacagcagagtccacgaatgccagcagcagatgttc
tggtcggatccgttcggggggcgacgtccagcagtccgcagccagccgggggagcgctca
cagtgggaaccgagtcccagcagggaggagagagaggtggtccgaaagaagctcctcgcc
atcttcagtgcacacctggtcgacacggccatggacatgtttcctcacatgatggatcca
cagatgctcgtcgctgagatcctcatgctgcagggtcagaaccggtctctgagatga
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