Seriola dumerili (greater amberjack): 111230731
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Entry
111230731 CDS
T05606
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111230731 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111230731 (xpc)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111230731 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
111230731
NCBI-ProteinID:
XP_022613282
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MAKRRAGTETEAGTKKPRQVPKTKGSAAKEREKKKDAGNGITEKEDTLERKVKAKKRRSP
KPPERNNSPSKTSIKTSAKTSAKTSIKTSIKTSAKTSTAAKTSKYFQSPVKQLEIDSEDE
FDMVTSPPPVVKVNAKKPEREEKEEEEEEEEEMEEDSEEDEDDWEEVEELAEPLGPVEPP
EPVLPSEPVEIEIETPEVRRKQKRKAEFETYLRRMMNRHKKDLLIDTHKVHLMCLIASGM
FRNRVCSEPDLLAITLSLLPPHFGLVAKERIDHNYLSGLLRWFRATFTLNPSLPCEERPD
PRALLERRLASLSARTHQEMTHLFLLVLRSLQLFCRLVLSLQPIPFKPPSAKGKGATTST
AVPGKSQETPKTPSPEPKVSPGSKRPAGAKGERGGKRAKRKDIKEEEAEEKVKTSGGQRP
KNSKRRSVASKVSYREESNSEQEEWLSDEDEFQASEEESEDSEREEKSTKKNNKKTAAPK
RRSGGGTKQVKAEGEEEEDGDEGEAKQKSGKKKKRREGPGADEWLEVYLEKTSSWVCVDV
EHGVGMPHLCSQNATAPVTYVVSVDGDGFVKDMGRKYDPTWMTSSRKRRVDDDWWEETLE
PFLGPEDERDVQEDKELQKKLLNKPLPISITEYKNHPLYALKRHLLKYEAIFPPTASVLG
YCRGEPVYSRDCVHTLHSRDTWLKEARTVRLGEEPYKMVRGFSNRSRKARMMSEQKDEND
LPLFGEWQTEEYQPPVAVDGKVPRNDYGNVYLFKPCMLPVGCVHLRLPNLHRVARKLDLD
AAPAVTGFDFHGGYSHAVTDGYIVCEEHEEVLRAAWVEEQELQKQKEKEKKEKRAISNWT
LLVKSLLIGERLKQRYGKKNQGLGGLAHGDDVGGLSSDEEAAGEGGGPGAMTASETLAMS
WPQNRQAEEDGGSGSGLKKKTTTKREKRGQEEHLFPFEKV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggagagcgggaacggagaccgaggccggtacaaagaaaccgaggcaggtg
ccgaagacgaagggcagcgccgctaaagagagagagaagaagaaagatgcaggtaacggc
atcacagagaaagaggacacgcttgagaggaaggtcaaagccaagaaacgtcggtcccca
aaaccaccagagagaaacaactctccctccaagaccagcatcaagaccagcgccaagacc
agcgccaagaccagcatcaagaccagcatcaagaccagcgccaagaccagcactgctgcc
aaaaccagtaaatacttccagtcaccagtgaagcagctggagatcgacagtgaagatgag
tttgacatggtgacatcaccaccacctgtggttaaagtgaacgccaagaaaccagagaga
gaagagaaggaggaggaggaggaggaggaggaggagatggaggaggacagtgaggaagac
gaggatgattgggaggaagtggaagagctggctgagccgctgggtccagttgaacctcca
gaacccgtcctcccctcggagcccgtggagatcgagatcgagactccggaggtcagacgg
aagcagaagagaaaggcggagtttgagacatacctgaggaggatgatgaacagacacaag
aaagacctgctgatagacacacacaaggttcacctcatgtgcctcatcgccagcgggatg
tttcgtaaccgtgtgtgcagcgaacccgacctgctggccatcactctgtcgctgctgccc
ccccacttcggcctggttgctaaggaacgcatcgaccacaactacctctctggactgctc
agatggttcagagcaacgttcaccctcaaccccagtcttccctgtgaggagcgtccggac
ccccgggctctgctggagaggcggctggccagcctgtcagccaggacccaccaggagatg
actcatctcttcctgctcgtcctcaggtctctgcaactcttctgccgattggttctttct
ctgcagccgatccccttcaaacccccgtcagccaagggcaaaggggccacaacatcgacc
gctgtcccaggaaagagccaagagacccccaagaccccctcccccgagccgaaggtctct
cctggctccaagagaccggccggagcgaagggagagcggggcggaaagagagcaaagagg
aaagacataaaggaagaggaggcggaagagaaggttaaaacgtcaggaggacagagaccg
aagaactctaaacgccgcagtgtcgcctccaaggtcagctacagggaggagagcaacagc
gagcaggaggagtggctcagcgacgaggacgagtttcaggcgagtgaggaagagagtgaa
gattcagagagggaggagaaatccacgaagaagaacaacaagaagactgcagctccaaag
agaaggagtgggggagggacaaaacaggtaaaagctgagggggaggaagaggaggatggt
gatgaaggagaagcaaagcaaaagagcgggaagaagaagaagaggagggaggggcctgga
gcggacgagtggctggaggtgtatctggagaaaacgtcctcctgggtttgcgtggatgtc
gagcacggtgtcgggatgcctcacctctgctcccagaatgcaacagcaccggtgacgtac
gtggtgtcagtggacggggacgggtttgtgaaggacatggggaggaagtacgaccccacc
tggatgacgtcgtccaggaagaggcgggtggacgacgactggtgggaggaaacactcgag
ccgttcctgggacccgaggatgagcgggacgtacaggaagacaaggagctgcagaagaag
ctcctgaacaaacctctgcccatctccatcaccgagtacaagaaccacccgctctacgcc
ttaaagagacacctgctgaagtatgaggccatcttccctccaacagcgtctgtgttgggc
tactgcagaggagagccggtctactccagagactgtgttcacaccctccactccagagac
acgtggctgaaagaagctcggactgtcagactcggagaagagccgtacaaaatggtgagg
ggtttctctaatcgctcccgtaaagccaggatgatgtctgagcagaaggacgagaacgac
ctgccgctgttcggagagtggcagactgaagaataccaacctcctgtcgctgtggacggg
aaggttccccgtaacgactacggtaacgtgtacctgtttaagccctgtatgttaccggtg
ggctgtgttcacctcaggctgcccaacctgcaccgtgtggcccggaagctggacctggac
gccgcccccgccgtcaccggcttcgacttccacggaggatactcgcacgctgtgacggat
ggttacatcgtgtgtgaggagcacgaggaggttctcagagcggcctgggtggaagaacaa
gagctgcagaaacagaaggagaaggagaaaaaggaaaagagggcgatctccaactggact
ctgctggtgaaaagtctcctgatcggagagagactgaaacagcgctacggtaagaagaac
caggggctggggggcctcgctcacggagacgatgtcgggggtctttcatccgacgaggag
gcggcgggtgagggtggaggccccggagctatgaccgcatctgagactctggccatgtcc
tggccccagaacagacaagctgaggaggacggagggagcggcagcggcctgaagaagaag
acgaccacgaaacgagagaagagaggacaagaggaacatctgttccccttcgaaaaagtg
tga
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