KEGG   Seriola dumerili (greater amberjack): 111230996
Entry
111230996         CDS       T05606                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111230996 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111230996 (ndc1)
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111230996 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup UNC-79
Other DBs
NCBI-GeneID: 111230996
NCBI-ProteinID: XP_022613646
UniProt: A0A3B4U3P8
LinkDB
Position
Unknown
AA seq 676 aa
MSIYPNNMFSTKQTCWFIRKVICWRAVASIAWAVLLLPPITAVFVILSRFNLLHPIHTIT
ECFSLLTSASAIFSFILLGGVILMVGFLNLEYYTVIPAIACSKIALLGQLLHPRQFVNSL
VHCIMGLIVAWCCAVFIGGSYETLSYPCMQSDGSSQMCLNEYHLVLMLAGAFVGFSHSLL
GVIHNMNYVSFHTVQQYKYLRFKGSLPLVVKCSATQALYSIRNFIALYFFLGYIPRAWIC
KTLNLHLNSSIHTLDSIAGLLDLSLLYQLWMSATFLLFTWYITLLLFRIFVTEVCSFPVQ
SSFNEDVHQCLPKVLTGKQPMILKFLALQDLALLSQRSPSRRCEVFSLSQPGGHPHNWNA
ISRECLSLLADLTQRLVAYHDTVATNGRAKSLSTGSERKTSSETSVISGTEDMMSPRPTM
LMKTPASVFSRSIIGGAQSPLTVPFTPDLDSPFASPALRRLTAPAEQCSPWYGTVQSPHI
MRRAPKLWSTSTDSQANSSLPPSPASVPSPKQEASKPSLLAQFLQNRKEQVKNFLAKRVL
IMYLFNKLPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLVL
QEAVDRHFKLPHASSKPVRSTSSMGDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQM
SAEHRKRLQQFLEYKE
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgtctatttatccaaacaacatgttttctacaaagcaaacttgttggtttatccgcaag
gtgatttgctggagagcagtggccagtattgcttgggctgtcctgttgttgccacccatc
acagcagtttttgtaatcctcagcaggttcaatcttctccaccccatccacacaataaca
gaatgtttctccctgttaacgagtgcaagtgccatcttctccttcatcctgctgggtgga
gtgattctcatggtggggttcttaaacctggagtattatacagtcatcccagctattgca
tgctcaaaaatcgccctgttgggtcagctgctccaccctcgtcagtttgtcaactccctt
gtccactgcatcatgggattaattgtggcttggtgttgtgccgtcttcattgggggcagc
tatgagacgctcagctacccatgcatgcagagtgatggttcctctcagatgtgtctgaat
gaatatcacctcgtccttatgctggctggagcctttgttggattttctcacagtctattg
ggtgtgatccacaacatgaactatgtctccttccacactgtccagcaatacaaatacctt
cgcttcaagggatccctgcctttggtggtgaagtgcagtgccactcaagcactttactct
atcaggaacttcattgctttgtatttctttttgggatacattccaagagcatggatctgt
aagactctgaatcttcacttgaacagctccatccacactcttgacagcatagctggactg
ctggacctgtccttgctctaccagctgtggatgagtgccaccttcctcctcttcacatgg
tacatcactctgctgctcttcaggatatttgtcacagaggtgtgcagttttcctgtgcag
tcatcatttaatgaagatgtccaccagtgtcttcccaaagttcttacaggcaagcagcca
atgatattaaagttcctagctctgcaggacttggctctgctgtctcaacgttccccatca
cggcgctgtgaggtcttcagtctgagtcagccaggtggccatcctcataactggaacgcc
atcagtagggagtgtctgtctctgctggctgatctgacccagagacttgtagcctatcat
gacactgtagcaaccaatggcagggccaaatcactgtctactggaagtgaaaggaagact
tcatctgagacatcagtaatctcaggtacagaagatatgatgtccccgaggcccactatg
ttgatgaaaactccagcttcagtcttttcccgctctattattggaggtgcacagagccct
ctgacagtaccattcactcctgacctggacagcccatttgcttctccagccctgcggcgc
ctcactgctccagcagaacaatgctctccgtggtacggcacggtgcagagccctcacatc
atgaggagagcaccaaaactctggtccacctccacagattcacaggccaacagcagtctc
ccaccatcccctgcctcggttcccagtcccaagcaggaagcctccaaaccaagtctcctg
gctcagttcctccagaacagaaaagagcaggttaaaaatttcttggcaaagcgggtgctg
ataatgtatttgtttaacaagcttccagaagcctcgagtcaggccctctttgctgacagc
caggctcacatctgggctttagaaggactgtcttatcttgttcaagcctccttctcagaa
gaccagtttggggttgtacagactacattacccagcattctcagctgcatgctggtcttg
caagaggctgtagatcgtcacttcaagctgcctcatgcctccagtaagcccgtcaggtcg
acaagcagcatgggagactcgacttacaaaacactgcgctttgctctcagggccacactc
aagactgccatctacaggataacaaccacttttggtgatcacttaaatgctgttcagatg
tctgcagagcaccggaaaagactgcagcagtttctggaatacaaggaataa

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