Seriola dumerili (greater amberjack): 111230996
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Entry
111230996 CDS
T05606
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111230996 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111230996 (ndc1)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111230996 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
UNC-79
Motif
Other DBs
NCBI-GeneID:
111230996
NCBI-ProteinID:
XP_022613646
UniProt:
A0A3B4U3P8
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MSIYPNNMFSTKQTCWFIRKVICWRAVASIAWAVLLLPPITAVFVILSRFNLLHPIHTIT
ECFSLLTSASAIFSFILLGGVILMVGFLNLEYYTVIPAIACSKIALLGQLLHPRQFVNSL
VHCIMGLIVAWCCAVFIGGSYETLSYPCMQSDGSSQMCLNEYHLVLMLAGAFVGFSHSLL
GVIHNMNYVSFHTVQQYKYLRFKGSLPLVVKCSATQALYSIRNFIALYFFLGYIPRAWIC
KTLNLHLNSSIHTLDSIAGLLDLSLLYQLWMSATFLLFTWYITLLLFRIFVTEVCSFPVQ
SSFNEDVHQCLPKVLTGKQPMILKFLALQDLALLSQRSPSRRCEVFSLSQPGGHPHNWNA
ISRECLSLLADLTQRLVAYHDTVATNGRAKSLSTGSERKTSSETSVISGTEDMMSPRPTM
LMKTPASVFSRSIIGGAQSPLTVPFTPDLDSPFASPALRRLTAPAEQCSPWYGTVQSPHI
MRRAPKLWSTSTDSQANSSLPPSPASVPSPKQEASKPSLLAQFLQNRKEQVKNFLAKRVL
IMYLFNKLPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLVL
QEAVDRHFKLPHASSKPVRSTSSMGDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQM
SAEHRKRLQQFLEYKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttatccaaacaacatgttttctacaaagcaaacttgttggtttatccgcaag
gtgatttgctggagagcagtggccagtattgcttgggctgtcctgttgttgccacccatc
acagcagtttttgtaatcctcagcaggttcaatcttctccaccccatccacacaataaca
gaatgtttctccctgttaacgagtgcaagtgccatcttctccttcatcctgctgggtgga
gtgattctcatggtggggttcttaaacctggagtattatacagtcatcccagctattgca
tgctcaaaaatcgccctgttgggtcagctgctccaccctcgtcagtttgtcaactccctt
gtccactgcatcatgggattaattgtggcttggtgttgtgccgtcttcattgggggcagc
tatgagacgctcagctacccatgcatgcagagtgatggttcctctcagatgtgtctgaat
gaatatcacctcgtccttatgctggctggagcctttgttggattttctcacagtctattg
ggtgtgatccacaacatgaactatgtctccttccacactgtccagcaatacaaatacctt
cgcttcaagggatccctgcctttggtggtgaagtgcagtgccactcaagcactttactct
atcaggaacttcattgctttgtatttctttttgggatacattccaagagcatggatctgt
aagactctgaatcttcacttgaacagctccatccacactcttgacagcatagctggactg
ctggacctgtccttgctctaccagctgtggatgagtgccaccttcctcctcttcacatgg
tacatcactctgctgctcttcaggatatttgtcacagaggtgtgcagttttcctgtgcag
tcatcatttaatgaagatgtccaccagtgtcttcccaaagttcttacaggcaagcagcca
atgatattaaagttcctagctctgcaggacttggctctgctgtctcaacgttccccatca
cggcgctgtgaggtcttcagtctgagtcagccaggtggccatcctcataactggaacgcc
atcagtagggagtgtctgtctctgctggctgatctgacccagagacttgtagcctatcat
gacactgtagcaaccaatggcagggccaaatcactgtctactggaagtgaaaggaagact
tcatctgagacatcagtaatctcaggtacagaagatatgatgtccccgaggcccactatg
ttgatgaaaactccagcttcagtcttttcccgctctattattggaggtgcacagagccct
ctgacagtaccattcactcctgacctggacagcccatttgcttctccagccctgcggcgc
ctcactgctccagcagaacaatgctctccgtggtacggcacggtgcagagccctcacatc
atgaggagagcaccaaaactctggtccacctccacagattcacaggccaacagcagtctc
ccaccatcccctgcctcggttcccagtcccaagcaggaagcctccaaaccaagtctcctg
gctcagttcctccagaacagaaaagagcaggttaaaaatttcttggcaaagcgggtgctg
ataatgtatttgtttaacaagcttccagaagcctcgagtcaggccctctttgctgacagc
caggctcacatctgggctttagaaggactgtcttatcttgttcaagcctccttctcagaa
gaccagtttggggttgtacagactacattacccagcattctcagctgcatgctggtcttg
caagaggctgtagatcgtcacttcaagctgcctcatgcctccagtaagcccgtcaggtcg
acaagcagcatgggagactcgacttacaaaacactgcgctttgctctcagggccacactc
aagactgccatctacaggataacaaccacttttggtgatcacttaaatgctgttcagatg
tctgcagagcaccggaaaagactgcagcagtttctggaatacaaggaataa
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