Seriola dumerili (greater amberjack): 111231029
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Entry
111231029 CDS
T05606
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111231029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111231029
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Major cadherins
111231029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
111231029
NCBI-ProteinID:
XP_022613698
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAPLLKCAVFILLAIFLTSVPVEAEGNDLHRQKREWILAPRKLKENIDYTGLQFIAKIHS
DKASKQSKILYYLTGPGVDEPPQHRFSIDAQTGYVKVNVILDREDIAFYHLKGSAKYIDG
TPAENDIDLKITVEDENDNPPIIQAKQVGFVNESSAAGTFVMKVIATDADEANTTRSKIY
YSIVEESSSAGMFYINSQTGEVIVKRNTLDRETKATYTLTVSATDMEGQAIGKTGTEQIE
IKILDINDNVPTLEKETYEGSVEENTINVEVMRIKAIDMDLIHTDNWLAVFEIISGNEAG
YFSITTDNKTNEGIIMIHKALDYEQLKMLNLEVAISNIAKYNLGTTTSTTKSYPIKINVI
NQKEGPRFQPTTKVVSVSEGNDSVFINKIITNYAAIDSDTLQKATNVRYAKLYDEDNWLI
IDEKTADIKLNKLPDRESKYLINGTYYAKIICISNETPSKTATGTIAIQVEDFNDHCPKL
TATTHTMCLEDNVIYATAVDEDEFPNSAPFEFTVIQGSSKGKWTVEHLNETTAILRDQAK
LWPGIYRVAVDVKDQQGKSCGDVQMMDVTVCTCHESTKTCMSRQTTTSGFGAAGVLLLLL
GLLLLLLLPLLLLFCLCGGAAAMGNFKPIPFDTKQGLISYHTEGQGEDKEVPLLHVPVEV
DHGTVNANDGNGANGYGELGGGAGGGQIFIINDKKNYGHYVMGQKEREVPVSGMMIGQED
HFSQYGAGAFDGMALSEQFLEEYYSSKSNHAVQQCQQTDALLVYDYEGQESLAGSVGCCS
LLENDDDLAFLNDLGPKFKTLAEICQGSNIVIESVDISPIRPVSPVRPSTHTHVQTHTES
MRERDHVNINTINTSNVASGSSTIIQDKIMMPSPTVLIQQPTMYYAATPMYVVESQPQMV
LVAGGTQQQSVAQVGLSQGLVQVGGLQGPQGVVLVDRQVGMGGVTGQVAQGLSQGTVSRS
RKVLVVENGSSGGGQGLGQGSTAQGLEVSQGVQSFSLSSHGSTGSHDDSSVIATPKLQGN
QKLVVQHKKVLVTERNFESSTRA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctccactgctgaaatgcgccgttttcatcctgctggcgatcttcctaacgtcagtt
ccggtggaggcagaaggaaatgacttacacagacagaaaagagaatggatcctggccccc
aggaagctgaaggagaacatcgattacaccggcttgcagtttattgctaaaattcactct
gacaaggcaagcaaacagtcgaagatattatattatctaacagggcccggtgttgatgag
ccacctcaacatagattttctatcgacgctcaaactggctatgtgaaagtcaatgtcatt
ctggatcgagaagatatcgccttctatcatttgaaaggtagtgcaaaatacatcgacggg
acccccgctgaaaatgatattgaccttaaaattaccgtggaggatgagaatgacaaccca
ccaatcattcaagcaaagcaagtcggatttgtcaatgaatccagtgcagcaggtactttt
gtcatgaaagtgatagctactgatgctgatgaagcgaacacaacccgatccaagatctac
tacagcattgtggaggagagtagctcagctgggatgttctacatcaactctcagaccggg
gaggtcatagttaaaaggaacactcttgatagggagacgaaagctacatatacgttgact
gtcagtgccactgacatggaagggcaagcaataggaaaaacaggaaccgagcaaattgag
atcaaaattctggacataaacgacaatgttccaaccctggaaaaagaaacgtatgaaggg
agtgtggaagagaacaccattaatgtggaagtgatgaggatcaaagccattgacatggat
ctgattcacactgacaactggctggctgtcttcgaaatcatttcagggaatgaggcaggc
tatttcagtatcaccactgataataagaccaatgagggaattatcatgattcacaaggcc
ctggactatgagcaactaaagatgctcaacttggaagtggctatttccaacatagcaaag
tacaatttggggacaaccacctcaaccacaaaatcctaccccattaaaatcaatgtgatc
aatcagaaggaaggcccccgtttccaaccaactaccaaagtggtgtctgtctctgagggc
aacgattccgtcttcatcaacaaaatcatcaccaattacgctgctattgacagtgacaca
ctacagaaagccaccaacgtaaggtatgcaaaactctatgatgaggacaactggttgatt
attgatgaaaagacagcagacatcaagctgaataaactgcctgacagagagtccaagtac
ctgattaatggaacatattatgccaaaattatatgtatctccaatgagacaccctcaaaa
actgccacagggaccatagccattcaggtggaggactttaatgatcactgtccaaaactg
accgctacaactcacaccatgtgcctcgaggataatgtgatctacgccacagcagtagac
gaggatgagttccccaattcagcaccatttgagttcactgtgattcagggaagcagcaag
gggaaatggacagtggagcatcttaatgaaaccacagccatcctgcgagaccaagccaaa
ttgtggccaggcatctacagagtggcagtggacgtcaaggaccagcaaggaaagtcgtgt
ggtgatgttcagatgatggacgtaacagtatgcacctgccatgaaagcactaaaacctgc
atgtcacgccagacaacgacttcaggttttggagctgcaggtgtcctgcttctgctcctg
ggactgctgctactgctgttgctgcccctgctgctgctgttctgcctatgtggaggtgct
gcagctatgggaaatttcaagcccattccatttgatacgaaacaagggctaatctcatat
cacaccgagggacagggagaagacaaggaagttcctcttctacatgtcccagtggaagtt
gatcatggcacagttaatgccaatgacggcaatggggcaaatgggtacggagaacttgga
ggaggagctgggggaggccaaatttttataatcaatgacaagaagaattacggccattac
gtcatgggtcaaaaggagagggaagtacccgtttcaggaatgatgataggacaagaagac
catttctctcaatacggagctggggcctttgatgggatggctctatctgagcagttcctg
gaagagtattattcaagtaaatcaaaccatgctgtacaacagtgccagcagacggatgca
ctgctggtctatgactatgagggtcaggagtccctggcaggttctgtaggttgctgcagc
cttcttgagaacgatgatgatcttgcattcctgaatgaccttgggcctaaatttaaaacc
ctggccgagatctgtcagggatcaaacatagtgatcgagtctgtggatatctccccaatc
aggccagtgtctccagtcaggccctccacccacacacacgtgcaaactcacacagaatca
atgagggagagggaccacgtaaacatcaacaccatcaacacctccaatgtagcttcagga
tcgtctaccatcatccaggataagataatgatgcccagtccgacagtgctcatacagcag
cccactatgtactatgctgctacgcccatgtatgtagttgagtcccaaccccaaatggtg
cttgtggcagggggtacccagcagcagtcagtggctcaagttgggctaagtcaggggctg
gtgcaggttggtggtctccaggggcctcagggtgtggtccttgtggataggcaggtagga
atgggtggagtgacagggcaggtagcgcaaggcctttcacaaggaactgtctccaggtcc
agaaaagtgttggtggtggagaatgggtcctcaggtggagggcaaggtctaggacagggg
tctacagcacagggcttggaggtgagtcaaggtgtacagagtttttcactgagttcccat
ggttcaacaggatctcatgatgactcctctgtgatagccacacccaagctgcaaggtaac
cagaaactggttgtgcaacataagaaggtattagtcactgagagaaattttgaatctagt
acaagagcataa
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