Seriola dumerili (greater amberjack): 111231054 Help Entry 111231054         CDS       T05606                                  Symbol copa Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism sdu  Seriola dumerili (greater amberjack) Brite KEGG Orthology (KO) [BR:sdu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sdu04131]     111231054 (copa)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sdu04147]     111231054 (copa) Membrane trafficking [BR:sdu04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     111231054 (copa) Exosome [BR:sdu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    111231054 (copa)   Exosomal proteins of bladder cancer cells    111231054 (copa) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  111231054 NCBI-ProteinID:  XP_022613740 UniProt:  A0A3B4TQX9 LinkDB All DBs Position Unknown AA seq 1222 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMEAP GGEGWGDDAELQLDEDGFMDAQEGLGDEGVVREEGGGWEVEEDLDLPPELDIPAGAGGGA EDGFFVPPTKGMSPTQMWCNNSQLPVDHVLAGSFETAMRLLHDQVGVVNFGPYKSLFMQT LSRGRTCYLALPSLPCLRSHPQRNWKDCGAKQGLPAVGLRLSDLISRLQQCYQLTTAGRF EEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLEQQK RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR KILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICR VTQVTEIGKDVIGLRVSPLQFR NT seq 3669 nt NT seq  +upstreamnt  +downstreamnt atgttaacgaaatttgaaacgaagtcggcccgtgttaaaggcctaagttttcatcccaaa aggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggactatcggatg tgcactctgattgacaagtttgatgagcatgacggtcccgtcagaggcattgatttccac aaacagcagcctctgtttgtgtctggaggagatgattacaaaatcaaggtgtggaactac aagctgagacgctgcctcttcaccctccttggacaccttgactacatcagaaccaccttc tttcaccatgagtacccctggattctgagtgcctcagatgaccagactatacgcatctgg aactggcagtccaggacctgcgtctgtgtgctgaccggccacaatcactacgtgatgtgc gcccagttccatccatccgaggacctggtggtttccgccagtctggaccagactgtgcga gtgtgggatatctccggtctgaggaagaagaacctgtctcctggtgctgtggagacggaa gtgcgcggcatctctggcgttgacttgttcggtgcctcagatgctgtcgtcaagcatgtc cttgagggtcacgaccggggggtcaattgggcagccttccaccccagcatgcctctcatc gtgtctggagctgatgacaggcaggtcaagatctggagaatgaatgaatccaaggcatgg gagctggatacatgccgcggtcactacaacaacgtgtcctgtgccgtcttccacccacgt caggagctcatcctgtccaactctgaggacaagagcatccgggtgtgggacatgtccaag aggactggagtgcagaccttccgccgggaccacgatcgcttctgggtgctgggggctcac ccaaacctcaacctgtttgctgcaggccatgacagcggcatgattgtgttcaagctggag cgcgagcgtccggcatacgccgtgcacggtaacatgctgtactacgtcaaggatcgcttc cttcggcagctggacttcaacagcagcaaggacactgccgtcatgcagctacgcagtggg tcgaagtttccagtgttcagcatgtcttacaacccagctgagaacgccgtcctgctctgc actagggcgaccaacctggagaacagcacctatgacttgtactctattcccaaagaaagt gactctcagaaccctgatgctccggaggggaagagatcctcgggtctgacagcagtttgg gtggccaggaacagattcgccgtcctggaccgaatgcactctctgctgattaagaacttg aagaacgaaattgtgaagaaagttcaggtgccaagctgcgaggaaatcttctacgcaggg acgggctcgctgctgctgcgcgacgccgacggcgtcacgctgttcgacgttcagcagaaa cgctctttggccaccgtcaagattgccaaggtcaagtacgtggtgtggagcgccgacacc agccacgtggctctgcttgctaaacacgccatcatgatctgcaaccgtaaactggagagc ctttgcaacattcatgagaacatcagagtgaagagtggagcctgggacgagagtggagtc ttcatctacaccacctccaaccacatcaaatacgccctcacctctggtgatcatggcatc atcaggaccctggacctgcccatctatgtgacccgtgtgagaggcaacagtgtttactgc ctggacagggagtgtaggccgcgtgtcctcaccatcgaccccacggagtaccgcttcaaa ctggccctggtcaaccgcaaatatgatgaggtgcttcacatggtgcgtaacgccaagctg gtgggccagtccatcattgcctacctgcagaagaagggctaccctgaggtggcgctgcac tttgtcaaagatgagaagacacgctttagtctggctctggagtgtggcaacattgaggtg gcgctggaggcagccaaggccctggatgagcgcagctgctgggagcgtctgggcgaggca gcgctgctgcagggtcaccaccaggtcgtggaaatgtgctaccagaggaccaagaacttt gacaagctcaccttcctgtacctcatcactggcaacctggccaagctgcgcaagatgatg aagatcgctgagatcagaaaggacatgagcggtcactaccaggcagctctctacctggga gacgtcagtgagagggtccgcatcttgaagaactgtggacagaagtctctggcttacctg actgcagccacccatgggctggacgaagaggctgaggcgctaaaggagacctttgaccca gaaaaggagacggtgccagaggttgatccaaatgcacagctgctgcagcctcctccaccc atcaaccctctggacaccaactggcctctgctgactgtatcaaagggcttctttgaggga gccattgcagcgaaggggaaggcaggtcagatggctgccgatctggacatggaagctcca ggaggcgagggctggggagacgatgctgagcttcagctggatgaagatggtttcatggat gcccaggaaggattaggggatgaaggagtggtgagagaggagggaggaggctgggaggtg gaggaagacctggaccttcctccagagctggacattccagctggtgcaggtggaggagca gaagatggcttctttgtcccaccgaccaagggcatgagtccgacccagatgtggtgcaac aactcccagctgccagtggaccacgtcctggctggctccttcgaaacagccatgagactg ctccacgaccaggtgggagttgtgaactttggcccatacaagtcgctgttcatgcagact ctgtccagaggccgcacctgttacctggcactgccttccctgccctgcctgcgcagccat ccccagaggaactggaaggactgtggggcgaagcagggtctgcctgccgtgggcctgcgc ctctccgacctcatctcccgcctgcagcagtgctaccagctgaccactgctgggcgcttt gaggaagctgtggagcgctttagagccatcctgctttctgtgcccctgctggtggttgat aacaagcaggaaattgcagaggctcagcagctgatcacaatttgcagagagtacatagtg ggtctgaccatggagacagagaggaagaagctgcctaaagacacactggaacagcagaag aggctgtgtgagatggctgcttatttcacccactgtaatctccagcccgtccacatggtg ctggtgttgcgtacagctctgaacctcttcttcaaactgcgtaacttcaagacagctgcc ggctttgcacgacgcctactggaactggggccgaagccagatgttgcacagcagacccgc aagattttggctgcttgtgagaagaccttgacagacgcccaccagttgaactatgacccc cacaatccatttgacctgtgcgctgcctcttttgtccccctgtaccgtggacgccctgtt gagaagtgccctctgtctggagcctgctactgtcctacatacaaaggccaaatctgcagg gtcacacaggtgacagagattggtaaggatgtgatcggtctgcgtgtgagtccacttcag ttccgttga

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