Seriola dumerili (greater amberjack): 111231232
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Entry
111231232 CDS
T05606
Name
(RefSeq) macrophage mannose receptor 1-like isoform X1
KO
K06560
mannose receptor, C type
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111231232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111231232
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sdu04054
]
111231232
04090 CD molecules [BR:
sdu04090
]
111231232
04091 Lectins [BR:
sdu04091
]
111231232
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Phagocytosis
C-lectin receptors
111231232
Pattern recognition receptors [BR:
sdu04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
111231232
CD molecules [BR:
sdu04090
]
Proteins
111231232
Lectins [BR:
sdu04091
]
C-Type lectins
Others
111231232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
fn2
Chordopox_A33R
CysR_MRC2_N
UL45
Intimin_C
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
111231232
NCBI-ProteinID:
XP_022613990
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MLTIKITCTTLVLLIQTLQCLASDDSSFQLTNRATGFCLVKSHHFCHEIRWTTGDRLMVQ
WLSKCLGVQGKSVGSEISLYECDENSELQKWECKNETVLALKGQELYIELTADNTAVLSK
TIGPNNHLTISGTSSGACTRTYRELFTIGGNANGRTCMFPFMYKTKWYSDCTTVDVAEKH
LWCSVETKFEHNIWGFCPTNSKQHWNQNIATGVYYQLNTQSALTWSQAVASCKQQGASLL
SITDPHEKVYVTALLGAGGRGKGDKLWTGLTLDPEHGWQWSNGKPYRYVNWDSGHPLPNP
GQNCAIIDGAVQYSWQSSSCTRKLGYICNSDGTLAPPTEAVETGFCSSPWIPYNGHCFHL
NRTQKTWSEAQKACRKEGGDLVSICNVEDQSFVISQLGYASTDELWIGLNDRKTEGLFDW
TDHSTVTFTSWEFGKPSVFTDQEDCALIRGENGNWADRVCGEKHGFICMKTSATEPSGDE
VEQNAGCKIGWKRHGSYCYFVGTETKTFDEAKDGCKSSDSYLADVSTGVDNAFLVSLVGL
RPEKYFWLGLSNQKNIDQFVWTNTDSVRFTHWNAEMPGYQQGCVAMTTGFFAGLWDVLPC
DNKEKYICKHLAEGAVLTLAPPTVPTTKCADGWNQVASRKYCYKFFAETPLNKRTWYEAR
DYCMAIGGDLLSIHSTDDLKMPIKSYRTFWIGLSAPDPITGYVWSDGSPVNFQHWEDGEP
NNKNNVESCAEFNPYNQQRTGSWNDVQCEKYNGWICQIHAGKTPNPPPDPITPDNNKTSD
GWLEWNGIQYYINEKWMAMEDARNFCQQRHGDLVTINSEAENVFLWKQISRSYGSYWIGL
TVELDGTYEWIDGSQGEFERWDEGQPDFNTFDENCAVMVHETGFWHDYNCGFEHKSICKR
SGSPPANTTVAPTVPPKGGCLLPWKKINSKCYIIIKNQKLTWDGARKQCLTMNGNLASIP
SRDVQAFLVTQMADTPTTDLWIGFHSFHGHQFYWADGRPKSYVNLALNRLVYDDIFHRPH
RILDLNHLGDFDTHFYHEIHHFQRFETLFSQQRNKCAVINTNPLLGIGKWIPQSCNDTNG
FVCLQKADPSLPDSPEPTVTTDYAKIMNDSIKAVTQPMTWDEAKKHCEDDDANLASLRNE
WSQVYVEWLALSLNTSLWIGMNKMQTSGYFRYIDGWRMKFTSWGHNEPSPDRPCVFVDID
GKWKTANCNQTMNSVCMKSTDVPPTESSLFPGVCPDDPDSLKIGENYFWLPFKGYCYIFF
TDEKEWASAAASCARHGGSLASIEDPSEQEFIQNNTKTYKDSHTSFWIGLYKTHKGDWLW
LDNTVKDYTNWDEGQPTSQNHGAISTSDGTWRAGAQWYDRPYICKTPKVFLPVPSPAARV
GINPNHRGHIILAVVLVIAGIAVGGVIAFFLYKKSIPRLTIPGTLNTFDNPLFFSNEQSP
PETVDSGMKAEDVNHEPVITV
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgctaactatcaagataacttgtacaaccttggtgctactcatccaaacattacaatgt
ttggcttcagatgattcgtcatttcaactaacaaacagggccactggtttttgtttggtt
aaatcgcatcatttttgccatgaaattcgctggacaactggtgaccgacttatggttcag
tggctgagtaagtgccttggagtccaggggaaaagtgtggggagtgaaataagcctctac
gagtgtgatgaaaacagtgaactccagaagtgggaatgcaagaatgaaacagtgctcgct
ctcaaaggccaagagctttacattgagctcactgcagataacacagcagttctctctaaa
acaataggacccaataaccacctgacaatttcagggacgtccagtggtgcctgcacaaga
acatacagagaactttttaccataggaggaaatgcaaatggtaggacctgcatgtttccc
ttcatgtacaaaaccaaatggtactccgactgcactacggttgacgtggcggaaaagcac
ctatggtgttcagttgaaacaaaatttgaacataatatctggggcttctgcccaactaac
tccaaacaacactggaaccaaaacattgcaacaggagtgtattaccagctcaacacccag
tcagctctgacttggtcccaggctgtggccagctgcaaacagcagggtgcctccctgctc
agtatcaccgatccccatgaaaaggtttatgtcacagcactactaggagcagggggcagg
ggaaaaggggacaagctttggactggactgacactggatccagaacatggctggcagtgg
tctaacgggaagccttaccgttatgtgaattgggactcaggacatccacttcctaatcca
ggacaaaactgtgcaattattgatggtgctgtacagtactcctggcaaagttcatcatgc
accagaaaactgggctacatctgcaacagtgatggaactttggctcctcccactgaagct
gttgagacaggcttttgttcaagcccttggattccctacaatggtcactgcttccacctt
aatcgcactcagaaaacatggtctgaagctcagaaagcatgccgcaaggaaggaggggac
ttagtcagcatctgcaatgtggaggaccaaagctttgttatctctcaacttggatatgca
tccactgatgagctttggattggactgaatgacaggaagacagaggggctgtttgactgg
actgaccattctactgtcacctttaccagctgggagtttgggaaaccttctgtgttcaca
gaccaagaagactgtgctctcatcaggggagagaatgggaactgggccgaccgtgtgtgt
ggggagaaacatggcttcatttgtatgaagacaagtgctaccgaaccttctggagatgaa
gtggagcagaatgcaggttgcaaaattggttggaaaagacatggctcctactgctacttt
gtaggaacagagacaaagacgtttgatgaagcaaaagacggctgcaagagctcagactcc
tacttggcagatgtttcaactggggtggacaatgcattcctagtcagcctggtaggcttg
agaccagagaagtacttctggctaggactctcaaaccagaaaaacattgatcaatttgtg
tggaccaacacagactcagtgaggtttactcactggaacgctgaaatgccaggttaccaa
caaggctgtgttgccatgacaactgggttttttgctggcctctgggatgtgctgccctgc
gacaataaggagaaatacatttgcaaacacctggcagagggggcagttttaactcttgcc
ccaccaactgtccccacaacaaaatgtgcagatggctggaatcaagtggcatcaagaaag
tactgctataagttttttgcggagacacctttaaacaagaggacctggtatgaggccaga
gattactgcatggccattggaggagacctgctcagtattcatagcactgatgatcttaaa
atgccaataaagagctataggacattctggattggactcagtgcccctgacccaatcact
ggttacgtatggagcgatggatccccagtaaatttccaacactgggaggatggagagcca
aacaataaaaataatgtggaatcttgtgctgaattcaatccgtacaatcagcagcggact
gggtcttggaacgatgtgcagtgtgagaagtacaatggatggatttgtcagatccatgca
ggaaagactccaaacccgccaccagaccccatcactcctgacaacaacaagacctcagat
gggtggttggaatggaatgggattcagtattatattaatgaaaagtggatggccatggaa
gatgctcgcaacttctgccaacagaggcatggggacttggtgactatcaacagtgaggct
gaaaatgtctttttatggaaacagatatccaggagttacgggtcttactggattggcctg
actgtagaacttgatggaacctatgagtggatagatggttctcaaggggaatttgaaagg
tgggatgaaggtcagcctgatttcaatacttttgatgagaactgtgctgtcatggtgcat
gagactggattctggcatgattataattgtgggttcgagcacaagtccatttgtaaacgt
agtggctcaccacctgccaacaccactgtagcacccacagtgccccccaaaggtggctgc
ctactcccctggaaaaaaattaactccaagtgttacatcatcattaagaaccagaaatta
acatgggatggagcgaggaaacaatgtctaacaatgaatggaaacttggcctctattccc
tcaagagatgtacaagcatttttggtgactcaaatggctgacacacctactacagacctg
tggattggttttcatagtttccatggtcatcaattttactgggctgatgggcgaccaaag
tcatatgtcaacttggctttaaatagattggtctatgatgacatatttcatcgaccccac
aggattttggatctcaatcatctcggagattttgacacacatttttatcatgaaatccat
cattttcaaagatttgaaactctcttttctcaacaaagaaacaaatgtgctgtgatcaat
accaatcctctccttggtattggtaaatggatacctcagtcctgcaatgacaccaatgga
tttgtctgtcttcaaaaggctgacccatctctcccagactcccctgaaccaacagttact
accgactatgccaaaataatgaatgactccatcaaggctgtgactcaaccaatgacctgg
gatgaagccaaaaagcactgtgaagatgatgatgccaacctggctagcctgcgaaatgag
tggtcacaggtctatgttgagtggctggctctgagtctgaacacttctctgtggattgga
atgaacaaaatgcagaccagtggttatttcagatatattgatggctggcgcatgaaattt
acttcctggggtcacaatgaaccaagcccggaccgaccatgtgtctttgtagacatagat
ggaaaatggaagactgctaactgcaatcagaccatgaacagtgtttgtatgaagtcaaca
gatgtgccaccaacagagtcaagtctttttccaggagtttgccctgacgacccagattca
ttaaaaattggcgagaattatttctggctaccatttaagggttactgttacatatttttc
acagacgaaaaagagtgggcatctgcagctgctagctgtgcaagacatggtggatcacta
gccagcattgaagacccgtctgagcaagaattcattcaaaataacacaaagacatataaa
gacagccacacctctttctggatcggcttgtataaaactcacaaaggggactggttgtgg
ttggacaacacagtcaaggactacactaactgggatgaaggtcaacctacttctcaaaac
catggagcgattagtacttcagatgggacatggagggcaggtgcacagtggtatgataga
ccatacatctgcaaaacacccaaagtatttctaccagtgccatcaccagcagccagagtt
gggattaatcctaatcacagaggccacatcattttggcagttgtactggtcattgctggg
attgccgtggggggagtgattgccttcttcctctacaagaagtctattcctcgcctaacc
atccctggcacattaaacacctttgacaacccactgttcttcagcaatgagcagtcccca
cctgaaacggttgacagtggtatgaaggcagaggacgtgaaccatgagcctgttataact
gtatga
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integrated database retrieval system
