Seriola dumerili (greater amberjack): 111231288
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Entry
111231288 CDS
T05606
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111231288
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111231288
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
SALM family
111231288
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
111231288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_5
fn3
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
111231288
NCBI-ProteinID:
XP_022614054
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MPVPPPLNPCRRKHLPHTHLHPEQRAEHSTFPTTLFPPSIHSLSFLPPLLVSYLPSSSHL
VHCACPRATKRTLPDSVPFPAFHWLTLVTCCLLPSLIGAGETWGVVSACPFHCVCRNLSE
SLSTLCADKGLLFVPPHVDRRTVELRLADNFITEVGGNDFVNMTGLVDLTLSRNTIHLIR
PMAFADLESLRSLHLDGNRLTSLGPRDLAGLVNLQHLIVNNNQLVKVSAQAFDDFLLTLE
DLDLSYNNLRRVPWESIQNMASLHTLNLDHNLIDHIAEGVFGELYKLARLDMTSNRLRTL
PPDPLFARSQTGAISPTPYNAVISLNFGGNPLHCNCELLWLRRLIRGDDMETCATPAHLA
GRYFWSIPEEEFTCEPPLITRHTHKLWVLEGQRATLKCRSIGDPEPVVHWVSPDDRIIAN
SSRTSSFSNGTLDILVTVARDDGAYTCIAINAAGEATATVDLKIIPLPHRGGASGNTGNN
NVNTKNNRNVTNGILRTDPGSSDISTGKNGGINNGVGRGGEVEDGRRDGAEGEEGDGGRA
SEGERADGGSMEDEEGDEEEGRMVGVQGVTSTSAQVRWDLGRSSAAYVVWMYQIQYNCTA
DETLIYRILPSTSDRFLLKNLVSGVDYNLCVLAIFDDTITSLAATKVLGCTTFSTKDVYP
ACRSLQAHFLGGTLTILVGGVVVVTLLVFTVALMVRHRVCNHGDHMICHNSNTEAGGGAC
CQSGGVGGRDKGGNGGGCYQSNGSGDMMMVVLPNGLPSKRGGEKEKEKEKEKEAADSASS
LPPKLPPKPRPKPKVNLEQFLSAGGVVSTTTGAGREMALVVRQRKLEKAPPYTPESDRTP
LYYSPSPPSTLPRQSRSRDRPKPRLERELTNRASFSLAAPLRDSELLDWRITPRGRDKWN
SSQAYQSPVSPLSPACGTVSKRRHSLDMGSSVALATDAAATVAKRYGAVSYAKRLSVIWT
RRSQSLHGMLVQCASTTSTTSSTTSDEGEGGGGFGPRCEFQRGYIHAYNTTNSNSNAGIT
SGKAGSVKDRGREKGNDGRNAEELEESVV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccccccacccctcaatccctgcagacgaaaacacctgccccacacacacctt
cacccggaacaaagggcagaacattctacctttcctaccacccttttccctccatccatt
cactctctttcttttctcccccctctcctcgtctcatatttgccctcctcatcccatctc
gtccactgcgcctgccccagggctacgaaaagaacccttcctgattctgtccctttccca
gcgtttcactggctgacactggtcacatgctgcctgctgccatctctgattggagcaggg
gagacgtggggcgtggtctccgcctgtcccttccactgtgtgtgtcgaaacctttcagag
tcgctcagcacactctgtgccgacaaaggcctcctgttcgtccccccgcacgttgaccgg
cgcaccgtcgagctgcgactggctgacaacttcatcacggaggtgggcgggaatgacttt
gtcaacatgactggcttggttgatttgactctgtcaaggaacaccatccacctgattcga
ccaatggcttttgctgacctggagagtttgcgctcgctgcatctggatggtaatcgcttg
acgtcactgggccccagggacctcgcaggtttggttaatctgcagcatctgattgtcaac
aacaaccagctggttaaagtctctgcccaggcctttgatgacttcttgcttacactggag
gacctcgacctgtcctacaataacctcaggagggtaccgtgggagtccattcagaacatg
gccagtctgcacactttgaacttggatcataacctgatagaccacatagcagaaggagtc
tttggagagctatataagcttgcaagactggatatgacctccaacaggctccgaaccctg
cctcctgatcccctctttgcaaggtcccagactggtgcaataagtcccaccccctacaac
gctgtcataagtctaaattttggtggtaaccctctgcactgcaactgcgagctgctatgg
ttacggcggcttatccgtggagacgacatggagacgtgtgccacgccagctcacttggct
ggaagatatttctggtcaattcctgaggaggagtttacttgtgaaccaccactcatcacc
cgtcacacccacaagctgtgggtcttagagggccagcgagccacgctaaagtgccgttct
attggcgaccctgagccagtagtccactgggtttcaccagatgaccgcatcattgcgaac
tcgtcccggaccagctccttcagcaacgggaccttggatatcttagtaactgttgcccgg
gatgatggggcatacacgtgtatcgcaataaatgcagcaggtgaagcgactgctactgtg
gacctgaaaataatcccccttcctcatcggggaggagcaagcggaaatacagggaataac
aatgtgaacaccaagaacaacaggaacgtgaccaatggaattttacggactgatccaggc
tcctcggatatcagcacagggaaaaatggagggattaacaatggcgtaggacgtggagga
gaggtggaggacggaagaagagatggagcggagggtgaagagggcgatggtggcagggcc
tccgaaggagagagagctgatggcgggagcatggaggacgaggaaggggatgaggaggaa
gggaggatggtgggagtacaaggggttacatcaacctcggctcaggtccgatgggatttg
gggcgttcatctgcagcttatgttgtctggatgtatcagatacagtacaactgcaccgca
gacgagaccctcatctacaggattctaccatcgaccagtgaccgtttcctgttgaagaac
ttggtttccggtgtggactataacctgtgtgtcctcgccatttttgatgacaccattaca
tcattggcagcaacaaaagttctgggctgtaccacattttccaccaaggatgtttaccca
gcatgccgctctctccaagcccactttctgggcgggacactgaccatcttggttggtggt
gttgttgtggtcaccctactcgtgttcacagtggcgctcatggttcgtcaccgggtttgc
aatcatggtgaccacatgatatgtcacaacagcaacactgaggcaggaggtggggcctgc
tgtcaaagtggaggtgtagggggtagggacaaagggggaaacggtggcgggtgctaccaa
tcaaatgggtccggggacatgatgatggtggtcctgcccaatggtctgccttccaaaaga
ggaggcgagaaggaaaaggaaaaggagaaggagaaggaagcagctgattctgcatcctct
ctgcctccaaaactccctccaaagcccaggcccaagcctaaagtcaacctggagcagttt
ctttcagctggaggggtagtttcaacgacaacaggggcaggacgtgagatggcactggtg
gtgaggcagaggaagctggagaaggcgccaccgtacacccctgaaagtgacagaactccc
ctctactactccccttcccctccatccaccctgccccgtcagtcacgctccagggaccgc
cctaaaccccgcctggagagagaattgaccaatcgtgccagtttctctctggctgcaccc
ctgagagactcagagctgttggactggagaatcactccccgaggcagggacaaatggaac
tcctcacaggcctatcagagtccagtatcccctttaagtcctgcctgcgggaccgttagc
aaacggcggcactcgttggatatgggctcctctgttgccctagcaactgatgctgcggcc
actgttgccaagcgctacggtgctgtcagctacgccaagcgtctgagtgtgatctggacg
aggaggagccagtcgcttcatggtatgctggtgcagtgtgcctcgacgacaagcacaaca
tcttcaacaaccagcgacgagggcgaaggcggcggtggctttggaccacgctgtgagttt
cagcggggatacatccacgcttacaacaccaccaactccaactctaatgctgggatcact
agtgggaaagcaggcagcgtaaaagacagggggagagagaaagggaacgacggaagaaat
gctgaagaactggaggaaagtgttgtgtag
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integrated database retrieval system
