Seriola dumerili (greater amberjack): 111231427
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Entry
111231427 CDS
T05606
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111231427 (tbc1d1)
Membrane trafficking [BR:
sdu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111231427 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111231427 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
111231427 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
Hira
DUF2594
Motif
Other DBs
NCBI-GeneID:
111231427
NCBI-ProteinID:
XP_022614234
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MEGLYFEVKPRKDESHRPGSSEKPRINLTSNQQSCPSFPHLTSSTQSPQKLTRARERTAT
CIGKVEGEEEEEEVRYKLTLIGSLPVHHLTTMAMLPWVVAEISRSRPAEKDPATGLQSAG
PAAGELSPSTSNQMVFLCVSASWVRCVSVLGEGVVWDPLTHTVLFECRPHQVTKLIHNSQ
EPNSFGCLVRKTPDCACYVFQCQDSTKVPEIISTLRQAGKSSARNNDITTISNKTSTGGS
DPSEPCFSYLSATTTSAAPIIAVSPTAFAKKFEVLFCGRVSVAHKKAPPALIDECIEKFS
QLHGSGTTDKGGNVGGLVGGLRRALTFQSNGLGSGAVGNGSAGSPTTGKRPVLFKRDPSF
PCLQALDENGLSPEISHTNTTDALARSAEVQPTSLRENRTMLFTVGRSQIFLVSPDTKKV
AIEKSFREISFCSQGIRHVDHFGFICRETVEGGSCHFVCYVFQCTDESLVDEIMLTLKQA
FSVAALQQNAKTQSQQCDSCPMQQLHRLCERIEGLHPSKTKLELQRHLATLDNQEQASVF
ENTMRARPKSDQEENELVMASLRNLYEERQKSHQHTLPGDGKQVCEEAGPAPVEAQQQSS
SRQRLEQFKSRAKRSLTESLEGIWKGSSKARAQRDNSEGSDSSSSICTVNSSQDQPCLDD
PLSASSQLRPTSPLRCHNSTGDLKRLDTSLPLSPSSSSLPGDVQPQGFRRRASTFSHPPT
PSSGLEYSPVHTLIHTPQDPTAANKPKLVRHYSVSTDTPHQSNDVAALSTPSAACGVGES
PLRSHRHSWRQQIFLRVATPQKNTDTNERGDPCLEGGRVCVGQVGVGGSGDSSMRVVPEE
RTKRSKEELRELWRKAILQQILLQRMERENQKLQASESDLQNKRLKLDYEEITPCLKEVT
LVWEKMLGTPGRAKIKFDKETIHAAVAQGVPRQHRGEIWKFLSEQYLLRQTIPSRPPANH
TPYKELLKQLTSQQHAILIDLGRTFPTHPYFQAQLGAGQLSLYNLLKAYSLLDPEVGYCQ
GLSFIAGVLLLHMGEEDAFNMLKFLMYDVGLRKQYRPDMIILQIQMYQLSRLLHDYHRDL
YSHLEQQEIGPSLYATPWFLTAFASHFPLGFVARVFDMLFLQGSEVIFKVALSLLGSHKP
LILQHDSLESIVDFIKTTLPNLGLVQMEKTINQVCEMDVSKQLQAYEVEYHVLQDELLDT
PPTLNQHQRAAQLERTNQSLRQQNLDLLEELQVSQARVCSLESRVEVLGQSEGRLREQVS
ALEEEKNQLLSTVTRLQDLLTSLGIHNSPDGHTLSSPTERHAASAAAKTEDRKGLANRTE
DPLLHMLALPEGS
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactttactttgaagtgaagcccagaaaagatgaatcgcacaggccagggagc
tctgagaaaccccgcattaatctaacttcaaaccagcagtcgtgtccttcatttccacat
ctcacatcttccacacagtctcctcagaaactcacccgtgctagggagaggactgcaaca
tgcatagggaaggtggagggagaggaggaggaggaggaggtacgatacaaactgacattg
attggttctctgccggtccaccacctcaccaccatggccatgctgccctgggtggtggct
gagatcagcagatctcggcctgcagagaaggatccagccacagggttgcagtctgcaggg
cctgcagctggagagttgagcccttccacctcgaatcagatggtttttctatgtgtgtcg
gcatcatgggtgcgatgtgtatccgttctgggagagggagttgtctgggaccctctaaca
catacagtgctgtttgaatgtcgtcctcaccaggtgactaagctaattcacaacagccaa
gaacccaacagctttggctgcctggtcagaaagacaccagactgtgcctgctatgtcttc
cagtgccaggacagcaccaaggtccctgagatcatcagtacgttgaggcaggctggcaag
agctctgcacgcaacaatgatatcaccaccatttccaacaaaacttccaccggaggcagt
gacccctctgaaccatgtttttcttatctctccgcaacgacaacttcagcggcccccatc
attgctgtgtctccgacagcttttgccaaaaagtttgaggtgctgttttgcggccgcgtg
agtgttgctcacaagaaagccccacccgccctcattgatgagtgcatcgagaagtttagc
cagttacatggctcagggacgaccgataaaggaggaaatgttgggggattagtgggtggg
ctgaggagggcattaaccttccaatccaatggactgggaagtggtgctgttggtaatggt
tctgcagggagccccaccaccgggaagcgccctgtcctgttcaagcgagaccccagcttt
ccctgcctgcaggccctggatgagaacggactctcacctgagatttctcacaccaacact
actgatgcacttgcccgctctgctgaagtacagcccaccagcctgcgggagaacaggacc
atgctgtttacggttggcaggtctcagatcttcttggttagtccagacactaagaaggtt
gccatagagaagagtttcagagaaatctccttctgctcacagggtattcgtcacgtggat
catttcggcttcatctgcagagaaacggtggaaggagggagctgccactttgtttgctat
gtcttccagtgtacagacgaatcactggtggacgagatcatgctgactttgaagcaggcg
ttctctgtggcagccctgcagcagaatgcaaagacccagagccagcagtgtgacagctgc
cccatgcagcagctccacaggctgtgtgagcggatagaaggtctacacccatctaaaacc
aaactggagcttcagagacacttggccactctggacaatcaggagcaagcatcagtcttt
gaaaacactatgagggctcgtcctaagagcgatcaagaagagaatgagttggtaatggcc
tcactgaggaatctctatgaggagagacagaagagtcatcagcacacattacctggagat
ggcaaacaggtgtgtgaggaggcaggtccggcccctgtggaggcgcagcagcagagtagc
agccgccagcgacttgagcagttcaagagtcgagccaagcgctctctcactgagtccctg
gagggcatctggaaggggagcagcaaggccagagctcagagggacaacagtgaaggaagt
gacagcagttcttccatctgtactgtcaacagcagtcaggaccagccctgcttagatgac
cccttgtctgcctcctctcagctacgacccaccagcccactcaggtgccacaactcaaca
ggagacctgaagcgccttgacacctctctacccctgtccccctcctcctcctctttacct
ggtgatgtgcagccacagggcttccgtcgacgggccagcaccttcagccaccctcccact
ccctcctcaggacttgagtactcaccggtgcacacgctgattcacactccacaggacccc
actgctgctaacaagcccaagctcgtgcggcactactccgtcagcactgacacgccacac
cagagcaatgatgtagcggctctctctacaccaagtgcagcatgtggggttggagaaagc
cctctgcgcagtcaccgccactcatggaggcagcagatcttcctacgggtcgctacacct
cagaagaacacagacaccaatgagcggggggatccctgtctagaggggggtcgagtgtgc
gtgggccaggtgggagttggaggaagtggagactcatccatgagggtggtgcctgaggag
aggacaaaaaggagcaaagaggagctgagggagctgtggaggaaggccatcctgcagcaa
attctgctgcagaggatggagagggagaaccagaaactacaggcctcagagagcgacctg
cagaacaagcgtttgaagctggactacgaggaaatcactccatgtctgaaggaggtcact
ttggtgtgggagaagatgctgggaactcccgggagagcaaagatcaaatttgacaaagag
accatacatgctgctgttgcacaaggtgtcccgagacagcatcgaggcgagatctggaag
tttctttctgaacagtacctactcaggcagacgatcccctcccgacctcctgccaatcac
actccatacaaagagctgctgaaacagctcacctcgcaacaacatgccatcctcatcgac
cttggtcgcacttttcccacccatccatatttccaagcccagctgggggcaggacagctg
tctctgtataacttattgaaagcctactcactgctggaccctgaggtgggctactgccag
ggcctgtccttcattgcgggagtcctgctgttacacatgggggaagaggatgccttcaac
atgctcaaatttctgatgtatgacgtcgggcttcgtaaacagtacaggcctgacatgatt
atcctgcagattcagatgtaccagttgtcacggctgctccatgactaccacagggatctt
tacagccatctagagcagcaggagatcggacccagcttatacgccaccccctggttcctc
accgcctttgcctcacacttccccctcggcttcgtggccagagtctttgatatgttgttc
ctgcaggggtcagaggtcatcttcaaggtagccttgagcctgctggggagccacaagcct
ctgatcctgcagcacgatagcctggagtccatcgtggacttcatcaagaccaccctgccc
aacctgggcctggttcagatggagaaaaccatcaaccaggtgtgtgagatggatgtgtct
aagcagctccaggcctatgaagtggagtaccacgtcctgcaggatgagctgctggacacg
cccccaaccctcaaccaacaccagcgagcagcacagctggaaaggaccaatcagagcctc
cgacagcagaaccttgacctgcttgaggagctgcaggtgtcccaggctcgtgtgtgcagc
ctggagagtcgagtggaggttttgggccagtcggagggccgactgagggagcaggtttct
gcactggaggaggagaagaatcagttgctgagcaccgtcacacgcctccaggacctcctc
accagcctcggcatacacaactcccctgatggacacacgctctcctcacctactgaaaga
catgcagcctcagcagcagcaaagacagaagacagaaaggggctggcgaacaggactgag
gacccccttctccacatgcttgctcttccagagggttcgtaa
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integrated database retrieval system
