Seriola dumerili (greater amberjack): 111231431 Help Entry 111231431         CDS       T05606                                  Symbol rfc1 Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu03030   DNA replication sdu03410   Base excision repair sdu03420   Nucleotide excision repair sdu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sdu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     111231431 (rfc1)    03410 Base excision repair     111231431 (rfc1)    03420 Nucleotide excision repair     111231431 (rfc1)    03430 Mismatch repair     111231431 (rfc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sdu03032]     111231431 (rfc1)    03400 DNA repair and recombination proteins [BR:sdu03400]     111231431 (rfc1) DNA replication proteins [BR:sdu03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     111231431 (rfc1) DNA repair and recombination proteins [BR:sdu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      111231431 (rfc1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RFC1 BRCT AAA PTCB-BRCT AAA_22 AAA_30 Rad17 AAA_5 RuvB_N AAA_17 AAA_14 BRCT_2 AAA_33 AAA_7 AAA_18 AAA_16 NTPase_1 nSTAND3 RNA_helicase AAA_19 Motif Other DBs NCBI-GeneID:  111231431 NCBI-ProteinID:  XP_022614240 LinkDB All DBs Position Unknown AA seq 1162 aa AA seqDB search MDIRRFFAPTAGKAAVQKPAPNGNLKAEEEKKKKKKPQSPDEKRKDSEKKRKKHAVIESD SEEEPVKKSKKSPKEKQKTSKTSTPPKKDPVQYVSETDSDSDNFQSLKKVSKTKKNDTSK PTKSDAGSPRSGAETPVKPFSTQGKTGVKSPPKPVTPKSAPPPQPKKTPTSVFDYFGRGT IQRSDKKLVASTKRKAPTQDTDDLISDEEIARQLQMEEDMEMEKQVHEDEEFAKTLAMLD EEPQAKKARKGSDEKQAPATIPKKSCTDSAAGSTSSLTKTNRSVSEDVISPSPKKSPAPA KASSKLAMMKKKDEEKDVGTKGKTPISPTKIKTSPRKEPLTSSSSDMKFTPKTGTTPTAL KTSPKKPESTNTSPDDPEKKKVNSSAYRNYLNRDGPRALGSKEIPQGAENCLEGCVFVLT GVLESMERDDAKSLIERYGGKVTGNVSKKTTYVVQGRDSGVSKLEKAESLGTKILDEDGL LELIRTKPGKKSKYEIAAEAESKASKTRTPPSRTSKSTPKAQKISPSKGNSRSPHTPSPS KTGLAQGYGGKTGAGSTPPGRGSGHTARRGLGLSSSSTCSSSSPSPTGEDASLLWVDKYR PHSLKTVIGQQGDQSCANKLLRWLKNWHKNQSTASKPAARFGKFGGGKDDGSGFKAALLS GPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSIENFYKGTSQTV STKHVLIMDEVDGMAGNEDRGGIQEMIGLIRSSKIPIICMCNDRNHQKIRSLANYCFDLR FQRPRVEQIKGAMMSIAFKEGIKIPPPALNEIILASNQDVRQVIHNLSMWSAKDKVMTYD QCKSDAARARKDMKLGPFDVCRKVFTKGEETAHMSLIDKSDLFFHDYSLSPLFVQENYLH VRPAAAGGDLKSHLVLLSKTADSISDGDLVDRRIRSGQNWSLLPTQAIYASVLPGELMRG YMSQFPTFPSWLGKNSSTSKHSRIVQELASHMSLKTFSSRQAVNLDYLHYLRQALLSPLQ RHGAEGAGQAVQLLNDYQLIKEDVDSIMEISVWGGQPDPYSKLDSKVKAAFTRAYNKEVH LTPYSLQAVKKGRRGGGGGESELGGDDMDNGVQESEDEGEGLKADAMIKQKKAKATKESK TEKKEESGKGKGKGKGKGKAKK NT seq 3489 nt NT seq  +upstreamnt  +downstreamnt atggacatcaggcggttctttgcaccgactgcagggaaggctgcggtgcagaaaccagcc cccaatggaaacctgaaggcagaggaggagaagaagaagaagaagaagcctcagtctcca gatgagaagcgcaaggatagtgagaaaaaaagaaagaagcatgcagttatagagtcagac tcggaggaggagcccgtgaagaagtcaaagaaatcccccaaagagaaacagaaaaccagc aagacatcaacacctcccaaaaaagatcctgtgcagtatgtctctgaaacagactcggac agtgacaactttcaatccttgaagaaggtctccaagaccaagaagaacgacacgtccaaa ccgacaaagtcagatgcagggagtcctcgttcaggggccgagactcctgtcaagcccttc tccacacaagggaaaactggggtgaagtctcctcccaaacctgtcacccctaaatcagct ccaccccctcagcccaaaaaaacccccacctcagtatttgactacttcggtagagggacc attcagcgctcagacaagaagctggtggccagcaccaaacgaaaggctccaactcaggac acagatgatctgatcagtgatgaggaaatcgccagacagctgcaaatggaagaggacatg gagatggaaaagcaggtccatgaggacgaggagtttgccaaaacactggccatgctggac gaggagccacaggcaaagaaggctcgtaaaggctctgatgaaaaacaagcacctgccaca attcccaaaaagagctgcacagactctgctgctggcagcacaagcagcctcacaaagacc aaccgcagcgtgtcggaggatgtgatcagtccgtctcctaagaagagccctgcccctgcc aaagccagctccaaactggccatgatgaagaaaaaggatgaagagaaagatgtagggaca aagggcaaaacccccatttcacccacaaaaattaaaacctctcccagaaaggagcccctc acttcgtcgagctcagacatgaagttcacacccaaaacgggaacaacacccactgcactt aaaacttctcccaagaaaccagagagcacaaacacgagtcctgatgaccctgagaagaag aaagtcaactcttcagcttacagaaactacctcaacagagatggaccacgagctctgggc tccaaggaaatcccgcagggagcagagaactgtctggagggttgtgtgtttgtgttgacg ggggtcctggagtccatggagagagatgacgccaaatccctcatcgagcgctatggaggc aaagtgacgggcaacgtcagcaaaaagaccacttatgtggtgcagggcagggacagcgga gtctcgaagctggagaaggcggagagtcttggtaccaagatcctggatgaggatggtctg ttggagctgatcagaaccaaaccaggaaagaagtccaagtatgagattgctgcagaggct gagagcaaagcctcaaagaccaggactccacccagccggacttcaaagagcacccccaaa gcccagaagatatctccctccaagggtaattccaggtcccctcataccccgagcccgtca aagaccggcctggcacaaggttatggtggcaagactggagctggcagcactccacctggg agaggctcaggtcacacggccaggagggggctgggcctttcatcctcctccacctgttca tcatcttccccatcaccgaccggggaggatgccagtctgctgtgggtggacaagtaccgc ccacactctctgaagactgtgattggccagcagggtgaccagagttgtgccaataagctg ctgcgctggctgaagaactggcacaagaaccagagcactgcttccaaaccagcagcaagg tttggtaagtttggaggagggaaagatgatggatcaggatttaaagctgctctgctctct ggtcctccgggggttgggaagaccaccactgctgccctggtctgtgaggagttgggcttc agctatgtggagatgaatgccagctgtactcgtagcaaaaacagtctgaaggaagtcgtc gcagagtcacttaacaacaccagcatcgagaacttttacaaaggcacgtctcagactgtg agcactaaacacgtcctgatcatggatgaggttgatggcatggctggcaatgaggaccga ggaggaatccaggagatgatcggcctgatcagaagttcaaagattcccatcatctgcatg tgcaacgatcgtaaccaccagaagatcaggtcactggccaactactgcttcgatctgcgc ttccagaggccgcgagtggaacagataaagggagccatgatgtccatcgctttcaaagaa ggaattaagatcccacccccagctcttaatgaaattatccttgcttctaatcaggatgtc cgacaggtgatccacaacctgagcatgtggtcagctaaagacaaggtgatgacgtatgac cagtgcaagtctgacgcagccagagctcgcaaggacatgaaactggggccatttgacgtt tgcaggaaggtgtttaccaagggggaggagactgcccacatgagcctcatcgacaagtct gacctcttcttccacgactactcgctatcaccactcttcgtccaagagaactacctgcat gtccgtccagcggctgctggtggagatctgaagtcccacctggtgttgctcagcaagaca gcggactccatctctgacggagacctggtggacagacggatccgctctgggcagaactgg tcactgctgcctacccaggccatctatgccagtgtgttaccaggcgagctcatgagaggc tacatgagtcagttccccacattccccagctggcttggcaagaattcctccaccagtaaa cattcccgtattgttcaggagctggcctcacacatgagtttaaagacgttcagcagcaga caggcggtgaacctggactacctgcactacctaaggcaggcgctgctgagcccacttcag aggcacggagcagagggtgccggtcaagctgtgcagctgctgaatgactaccagctgata aaggaggacgtggacagcatcatggagatcagcgtctggggtggacagcctgacccctat tccaaactggactctaaggtcaaagcagctttcacgcgtgcatacaacaaagaagttcac ctgacgccgtactccctgcaagctgtgaagaagggccgccgtggtggaggtggtggggaa tcagagctgggaggagatgacatggacaacggagttcaggagtctgaggatgaaggagaa ggtctcaaagctgacgctatgatcaagcagaagaaggccaaggccaccaaggagtcaaag acagagaagaaagaagagtctgggaagggcaaagggaaaggcaaggggaaaggcaaggcg aagaaatga

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