Seriola dumerili (greater amberjack): 111231552
Help
Entry
111231552 CDS
T05606
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111231552 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111231552 (fip1l1)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111231552 (fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111231552
NCBI-ProteinID:
XP_022614411
UniProt:
A0A3B4THR0
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MSAEEADKTTTTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTEDAAAHAT
GNGVSSEATGEGAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKTTG
SRPYGQVATKLKGVDLDAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNEDTW
KAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDISSLPVHTSKPDFTSPVSLYKS
AVSQVTRISPPQWTGPPAQDMSYYTKTSGTIDVIGGQTATISRVEGRRRHNLDGNNIQVI
SEHSTSDAEPTPAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPG
FPPPPSGPPPAIIPTMDSGHPGGYDGRSVPPYPFPQGAYPPPMAGGVPPPWPPMMDNSKP
WDYYSRRDDKRDKDRERPRERTHEREREREHSPSAMSYTSDEERYRYREYQERGYGERHR
DRSSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKE
ASEEISADQENQEAME
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacaaccaccactgatgcgagcgctggagatgaggag
gaggaatggctatatggagatgaatctgagagcaaagacgaggatgaagaagccaaactg
aatgctgcagtcagtgcacctgctgatgcttctacagaagatgctgctgcacatgctaca
ggaaatggagtgtcctctgaggccacaggtgaaggagcaggtgaagatgtggacagtgac
agtgacagtgatgatgatgacgatgatgtccgagtgaccattggagacatcaaaacggga
gcaccacaatacacaacatatggagctcctcctgtaaatctcaacataaagacaacaggc
tccagaccttatggacaagtagccacgaagctgaagggagtggatcttgatgctcctgga
aacattaatggggttccagtgctggaggtggacatggagtcctttgaagagaagccctgg
aggaagccaggagcggatctgtcagactacttcaattatggcttcaatgaagacacgtgg
aaggcttactgtgaaaaacagaagagactgcgtatgggtctggaggtctctacagtcggc
tcggtgacgagcaagatcactgttcagcaaggcaggacaggcaatgagaaagacatatcc
agtttacctgttcacacctcgaagccagacttcacatctcctgtcagcctgtacaagtct
gccgtcagtcaggtcaccaggatctctccccctcagtggactggcccgcctgctcaggac
atgtcctattatacgaagacgagtggtaccatagatgtgattggtggacagacggccacc
atcagcagagttgaagggcgacgcagacacaacctagatgggaacaatatccaggtgatc
tctgaacactccacgtcagacgcggaacccaccccagctaagatacccaccttcttcccc
cctggaccacttcctcccaacatacccccacctccatttctccctccaccaccaaacgtc
agcactgcacccccactcatccccccacccaggttgcccattactgtccctcctcctggt
tttcctcctcctcctagtgggccccctcctgctattatacccactatggacagtggccac
cctggaggttatgatggacgctctgtccctccatatccgttccctcaaggtgcttaccct
ccacccatggctggaggtgtgcctcctccatggcccccaatgatggacaactctaaaccc
tgggactactattcacgtcgagatgacaagagagacaaggacagagaaaggccaagggag
aggacacatgagcgggagagggaaagggagcacagtccttcagctatgagctacaccagc
gacgaggagcggtatcgttaccgtgagtaccaggagcgtggttacggtgagcgccatcgt
gaccggtcgagccgagagaaagaggaaagacacagagagaggcggcaccgagagaaagag
gagggacgccacaagtcctctcgcagcagcagcagcaggaggaggcacgacagcgaggag
ggcgatagccaccggaggcacaaacacaagaagagcaagaggagcaaggagggcaaagag
gccagtgaggagatcagcgcagaccaagagaaccaggaggccatggagtag
DBGET
integrated database retrieval system
