Seriola dumerili (greater amberjack): 111231555
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Entry
111231555 CDS
T05606
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111231555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111231555
03036 Chromosome and associated proteins [BR:
sdu03036
]
111231555
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111231555
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111231555
Chromatin remodeling factors
BAF complex
111231555
PBAF complex
111231555
GBAF(ncBAF) complex
111231555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
111231555
NCBI-ProteinID:
XP_022614418
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPS
GYTQDNMHPLHKPMEGMHEKSMSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSASAPLDGPGGDQHTLGPNNRPGGP
TPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQQPMPSLAPGAGGG
PGGGPAGPGPGPMGSGYSRAHGMMGPNMPPPGPSGTPAVMQGQNPNGPPKSWPEGPLVNA
AAPSNAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRI
TPIQKPCGLDPVEILQEREYRLQARITHRIAELENLPGSLAGDLRTKATIELKALRLLNF
QRQLRQEVVVCMRRDTALETALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKH
QEYLNSILQHAKDFKEYHRSITGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMA
EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLEN
AEGQTPALGPDGEPLDETSQMSDLPVKVIHVDSGNILTGVDAPKAGQLETWLEMNPGYEV
APRSDSEDSEEEEEEEEEEEEPQPSAAPVEEKKKITDPDSEDVSEVDVRHIIENAKQDVD
DEYSGAAFARGLQSYYSVAHAVTEKVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGI
LADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKG
SPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQV
LNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL
NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGV
LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLY
RASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRG
MLLKTFNDPESEYFIFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQ
NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ
DEEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMK
DDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEMEEEVRHKKT
TRKRKRDRDLDLPGPSSSSGGRGRGDKDDDGKRQRKRGRPPVEKLSPNPPALTKKMKKIV
DAVIKYKDSASGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLE
RDVMLLFQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEDSEEEEEEQEEGS
ESESRSVKVKIRLGRKDKGGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEERSPSATDEE
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaccagacccccccatgggaggcaccccgcgcccaggtccttcccctgggccg
ggtccctcccctggggctatgctgggccccagccccgggccttctccaggctcctctcac
agtatgatgggccccagccctggtcctccatcctctggacactcacaaccagggccctct
ggatacacccaggacaacatgcaccctctgcacaaaccaatggagggcatgcatgagaag
agcatgagtgaggagagccgcttcagtcagatgaagggactgtctatgagacagggcgga
cacagtggtatgggccccccacccagtcctctggaccaacactcacaagggtaccactct
ccattaggtggctccgaccactccagccctgtcccttcaaatggccctccctccggtcct
cttatgccatcgtcctcttcttcctcatcctccggtggccccggctccgcctctgcacct
ttagatggccccggtggagatcagcacacactgggtcctaataaccgccctggtggccca
actcccttcaaccagaaccaactccaccaactcagagcccagatcatggcttataagatg
ctggctcggggacagcccctgccagaccaccttcagatggctgtccaggggaagaggcca
atgcctgggatgcagcagcagcagcccatgcccagcctggctcctggagctggaggtggg
ccaggaggtggaccagcaggacctgggcctgggccaatgggctcaggctacagccgagct
catggtatgatgggtcccaacatgcccccaccaggcccatcagggaccccagctgtgatg
cagggacaaaacccaaatgggccacccaagtcttggcctgaaggtcccttggtaaatgca
gcagctccctcaaatgcaccccaaaagttgatcccccctcagcccactggccggccctct
cctgctcccccttcagttccccccgccgcctccccagtaatgcctccacagacgcagtcc
cccggccagccagcgcagcctacccccatgatgccttaccacgccaagcaaaaccgcatt
acccccatacagaaaccctgcggcctcgacccagtggagatactgcaggagagggagtac
aggttacaggctcgtatcactcatcgtattgctgaactggagaacctgccaggttctctt
gctggtgatttacgtaccaaagctactatagagctcaaagcccttcgactgcttaacttc
cagagacagctgcgtcaagaggtggtggtgtgtatgcgtcgtgacacagctctagagact
gcccttgatgctaaggcctacaagcgtagcaagcgtcagtctctgcgagaggcccggatc
acagagaaactggagaaacagcagaagattgagcaagagcgcaaacgcaggcagaaacat
caggagtacctcaacagcatcctccagcacgccaaagacttcaaagagtaccaccgttca
attacaggcaaaattcagaaactgaccaaagctgtggccacttaccatgccaacactgaa
cgagagcagaagaaggagaatgagcgtattgagaaagaaaggatgaggaggcttatggct
gaggatgaggagggctaccgtaaactgatcgaccagaagaaggacaagcgtctggcctac
ctgctgcagcaaactgatgagtatgttgccaacctcaccgagctggtcagagctcacaag
gctgcacaggccctcaaagaaaagaagaagaagaagaagaaaaagaagaagttagagaac
gctgagggtcagactcctgccttgggccctgatggagagccactggatgagacgagtcag
atgagtgacctgcctgtaaaggtcatccatgttgacagtggaaacatcctgacaggggtg
gatgctcctaaagctggacagctggagacctggctggagatgaaccctggttatgaggtg
gcaccccgctcagacagtgaagacagtgaggaggaggaagaggaggaggaggaagaagag
gagccacagccttctgcagctccagtggaggaaaagaagaagattacagaccctgacagt
gaagacgtgtcagaggtggacgtccgacacatcatcgaaaatgcaaagcaggatgtggat
gacgagtacagcggtgcagccttcgctcgagggctccagtcttattactcagtggctcat
gctgtcacagagaaagtggagaaacagtccagtttgttaataaatggacaactcaaacag
tatcagattaaagggctggagtggcttgtttccctctacaacaacaacctgaatgggatc
ctggcggacgagatgggtctgggaaaaaccatccagactatcgccctcatcacgtacctc
atggagcacaaacgtctcaatggaccctacctcatcattgtacccctttcaactctttct
aactgggtgtatgagtttgacaaatgggcaccgacagtcgtcaaagtgtcctacaagggg
tctcctgctgccagaagagccttcgttccccaactacgtagtggaaaatttaatgtttta
ctcaccacctacgagtacatcatcaaggataaacaagtactggccaagatccgttggaag
tacatgatcgttgatgagggccaccgtatgaagaaccaccactgtaagctgacccaggtc
ttgaacacacactaccttgccccacggcgagtcctcctgacggggacaccgttgcagaac
aagctgcctgagctctgggcgctgctcaacttcctcctgcctactatcttcaagagttgc
agcacctttgagcagtggttcaacgctccgttcgccatgactggagagaaagtggatctt
aatgaagaggagaccatcttgatcatccgtcgtctccacaaagtgctccgccccttcctg
ttacgcagattaaagaaggaagtggaagcacagcttccagagaaggtggaatatgtgatc
aagtgtgacatgtcatctcttcagagggtgttgtacagacacatgcaggccaagggggtt
cttctgactgatggatcagagaaagacaagaagggtaaaggaggcacgaagacactgatg
aacaccatcatgcagctgaggaagatctgtaaccacccttacatgttccagcagatagag
gaatccttctctgaacatttaggattctctggtgggatagtccaggggcctgatctttat
cgggcatcaggaaagtttgaagtgttggatcgtatcctgcccaaactgagagctacaaac
cacaaagtgctgctcttctgtcagatgacctcactcatgaccataatggaggactacttt
gcataccgcaacttcaagtatctgcgtctggatggcaccacaaaggctgaagacagagga
atgttactaaagacgttcaatgatccagagtcggagtacttcatcttcctcctgagcaca
agagctggaggtctcggcctcaacctgcagtctgctgacaccgtggtcatctttgactct
gactggaacccacatcaggacctgcaggctcaggacagagcccaccgtattggtcaacaa
aatgaggtgcgagtgttgcgtctctgcacagtcaacagtgtagaggagaaaatccttgcc
gctgccaagtacaaactcaatgtggaccaaaaggtcatccaggctggcatgtttgatcag
aagtcttctagccatgagcgcagggcattcctgcaagccatcctggagcacgaggagcaa
gacgaggaagaggatgaggtgccagatgatgagacggtcaaccagatgatcgccaggagc
gaggaggagttcgaccagttcatgcgtatggacctggacaggcggcgagaagaggcccgt
aacccgcggcgaaaacctcgtctgatggaggaggatgagctgcccacttggatcatgaag
gacgacgcagaggttgagcggctgacctgcgaggaggaggaggagaaaatgttcggacga
ggttctcggcagcgaaaggaggtggactacagcgactcactgactgagaagcagtggctc
aaggcgatagaggagggaacactggaggagatggaggaagaggtacgtcacaaaaagacg
acccgcaagaggaagagggaccgggacctggatctacctggtccctcctcttcctccggg
ggacgaggacgaggggacaaagatgacgatgggaagaggcagaggaagaggggacgacca
cctgtggagaaactttccccaaatcctcctgccctcacaaagaagatgaagaagattgtg
gacgctgtcatcaaatacaaagacagcgccagtgggcgtcagctgagcgaggtgttcatc
cagctgccgtctcgaaaagagctgccagagtactacgagctgatccgcaagcctgtggac
ttcaggaagatcaaggagaggattcgaagtcatcgctaccgcagtctgggtgacttggag
agagacgtcatgctgctcttccaaaacgctcagaccttcaacctggagggatcactgata
tacgaagactccatcgtgctccagtcggtgttcaccagtttgaggcagaagattgagaag
gaggaggagagtgagggagaggatagtgaagaagaggaggaggagcaggaggaaggatca
gagtcagaatctcgctcagtgaaagtgaagatccgtctgggcaggaaggataaaggtgga
gatcgagggaagggacgcagcagacgaacaggacgcaccagagccaaacctgttgtcagt
gatgacgactctgaggatgagcaagaagaggagcgctcccccagtgccactgatgaagag
tcctga
DBGET
integrated database retrieval system
