Seriola dumerili (greater amberjack): 111231592
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Entry
111231592 CDS
T05606
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04371
Apelin signaling pathway
sdu04910
Insulin signaling pathway
sdu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111231592 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
111231592 (ppargc1a)
04920 Adipocytokine signaling pathway
111231592 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111231592 (ppargc1a)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
111231592 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SR-25
Motif
Other DBs
NCBI-GeneID:
111231592
NCBI-ProteinID:
XP_022614453
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISTQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
RSCPSSPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYTGGKAQNHAASSNHRIRPPPA
VVKTESPWNGKARGGSSQQNRPVRRPCTELLKYLTATDDILLHTKASEAKSTWGGASGRD
KSGLGLGASSSSSSPSSSSTSSFSSLSSTSSSSSSTTSKKKSAVPSQQQQQQQQQQLQQH
HQRGESRAAGECSVAGVGAGKWQRCTHDGGVEESEGASIPVGHRTSTCGHARPKLEHGPP
SEEGRPPGNVGRLAAARFIRYMHSYSLPPREVSHSCEHCREAAGATQASEGFGRQGRSSS
SGASRAPHRHITVTIRKRDEKPGHPLLSQLLTSKQRPAQYRAHLLPPKITPLPSTQGKLA
GKRSESPAQAVSKVEEEEFRGTTDFRNRGVSQAEEPESEPLLSPLALDLESWVSQADPVL
DMGFGLELGWPIQGGYGEDVDHDDDDDGVDDDDDDHVTGSPAAVLSQGPPSPLFPDTRIA
EPTPPCIIQGQGHPHRQALSEHPDDQGLPLLAKPTTLPLPLTPESPNDHKGSPFENKTIE
RTLSVEIAGTPGLTPPTTPPHKASQENPFKASLKTKLSSCSSSALACKRARLSELGPGAL
APAPGASGGGPNRKGPEQTELYAQLSKASTALPYSATQHTVVGGLEEHRSTSNNKRAAPR
GYSDHDYCQASASTKKDGGTATVTMTTAAEMTVTSGATAAPMPTAGTVEDRHVECKDSAM
PPSSSSSSSSCSPSSASSGPLAKQQNFASVDGEAVRVQGLGKQTLTQTTQIPSQEATTDR
DQQHPSATSRKLLCDQEIRAELNKHFGHPLQALYSQGGQEREPGSKPNKSAAPQSLKEGE
DEYLSQKLPGSNYLHPGFLPFHDELELGEGRESRFLYPWEGTPLDLLFDCPPCSPSCSPP
SSCSPSRGSVSPPSSLLLSPGRPFCWTSGGSRSRSRSHSGSRSSSSHYRRRSLSSSPDRR
PSSWSRHNTDSSTFRSRTYKSPHPQSRSPLSRRPRYDSYEEYQHERLKREEYRRDYEKRE
FERAEQRERQRQKAIEERRVVYVGRLRSNCTRTELKRRFEVFGEIEECAVNLRDDGDNFG
FITYRYTCDAFAALENGHTLRRSNEPQFELCFGGQKQFCKSHYTDLDSHSDDFDPASTKS
KYDSMDFDSLLREAQRSLRR
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaggactcggtgtggagagaattagagtgtgctgccttg
gttggtgaagaccagcccctctgcccagacctccctgaacttgacctctcagagctggat
gtcagtgacttagatgcagacagcttcctgggtggcctcaaatggtacagtgaccaatca
gagatcatttccactcagtatggcaatgaggcatccaatctttttgagaagatagatgaa
gaaaatgaggccaacttgctggcagtgcttacagagaccctggacagcatcccggtggat
gaggacggattgccttcgtttgaggccctggcagatggggacgtgaccaatgccagtgac
cggagctgtccctcctcccccgacggctcgccgcgcaccccagagcctgaggagccttcc
ctgctgaagaagctccttctggcacccgcaaactcccagctcagctataatcaatacaca
ggtggcaaggcacagaaccatgcagccagcagcaaccaccggatcagaccaccacctgcc
gtcgtcaagacggagagcccctggaatggcaaagcaagagggggctccagccaacagaac
cgcccggtgaggcggccttgcactgagctgctgaaatacctaacggccaccgatgacatc
ctgctccacaccaaagccagtgaagccaagagcacgtggggtggcgccagtggcagggac
aagagtggcctgggtcttggcgcctcttcctcctcctcgtcgccatcctcgtcatccacc
tcctcgttctcctccctctcctccacctcctcttcatcttcctccaccacctccaagaag
aagtcagctgtgccatctcaacaacaacagcagcagcagcagcagcagctgcagcagcat
caccagcgaggtgagagccgggctgcaggcgagtgtagtgtggctggtgttggggctggg
aagtggcagcgttgcactcacgatggcggtgttgaggagtcggagggtgcttctatccct
gtcggccacagaacctccacctgcggccatgcccgccccaaactggagcacgggccgccc
agtgaagaaggaaggccgccaggcaatgtgggccgcctggccgccgctaggtttattagg
tatatgcattcttattccctccctcccagagaggtgagtcacagctgtgagcattgccga
gaggctgcgggcgccactcaggctagtgagggctttggcaggcaaggccgtagtagcagt
agtggtgccagccgtgcaccacataggcacatcacagtgactattaggaaaagagatgag
aagccggggcaccccttacttagccagctgctcacctccaaacagaggcctgctcagtat
cgggcccaccttctcccacctaagatcacccctttacccagcactcagggcaaattagca
ggtaagaggtctgagagtccagcccaggctgtttcaaaggtggaggaggaagagttcaga
gggaccactgattttagaaaccggggagtaagtcaggctgaagagcctgagtcagagccc
ctgttgtcacctcttgccttagacctagagagctgggtcagccaggcagatccagtgcta
gacatgggctttggactagagctggggtggccaatccaggggggctatggggaggatgtt
gaccatgatgatgatgatgatggtgttgatgatgatgatgatgaccatgtcacgggcagc
cccgcagcggtgctctcacagggcccaccaagcccgctcttcccagatactagaattgca
gagcccacccctccctgcatcatacaagggcaagggcacccacacaggcaggcactcagc
gagcaccccgacgaccagggcctcccgttgttagccaaaccaaccaccttgccacttcct
ttgaccccagagtctccaaatgaccacaagggatcaccgtttgagaacaaaaccattgaa
cgcacattaagtgtggagattgctggaaccccaggtctgacaccacctaccacgccccca
cacaaagccagtcaagagaatcctttcaaagcatcgctcaaaaccaagttgtcttcatgt
tcctcctcagctttggcatgcaaaagagccaggttgagcgagttgggccccggcgctctg
gccccggccccaggtgcctcaggcgggggccccaacaggaagggtcccgaacagactgag
ctttatgcccagctgagcaaagcgtccaccgccctcccttactccgccacccaacacaca
gtggtgggcggccttgaggagcatcgcagcactagcaacaataagcgggcggcgccccgt
ggctacagtgaccatgactattgccaagcgtcagctagcactaagaaggacggcggcaca
gccactgttaccatgactacagcagcggaaatgacagtcacctcaggtgccactgctgct
cccatgcctactgcaggcacagtggaggacaggcatgtcgaatgtaaggactcagccatg
ccaccatcctcttcatcatcttcatcttcttgctctccatcatcagcttcatctggtccg
ttggctaagcagcagaattttgcctctgtggatggagaagcagtccgggtccaggggtta
gggaagcagacccttacacaaaccacccagatcccctcacaagaggccactactgacagg
gaccaacaacacccttctgccaccagccggaagctcctgtgcgaccaagaaattagagca
gaactcaacaagcactttggccaccctttacaagccctctacagtcagggtggtcaggaa
agagaaccaggcagcaaaccgaacaagtctgcagcccctcagtccctcaaggagggagag
gacgagtacttatcccagaagctgcctggctccaattacctgcatccaggcttcctgccc
ttccacgatgaactagagctgggtgagggccgtgagagtcgcttcctctatccatgggag
ggcacccctctggacctactctttgactgccccccctgctctccctcctgttccccacca
tccagctgctccccttcgcgaggctccgtctccccaccttcctccctcctcctctcgcca
ggcaggcctttctgctggaccagcggcgggtcccgctcccgttctcgttcccactccggc
tcccgcagctcctcctcacactaccgaaggcgctctctctccagctcacctgacagacgc
ccctcttcctggtctcgtcacaacacagattcaagcacttttcgctccaggacttacaag
agcccccaccctcagtctcgatctcctctcagccgcaggccaaggtatgacagctatgag
gagtaccagcacgagaggctgaagagggaggagtaccgccgggactacgagaagcgggag
ttcgaaagagccgagcagagagagaggcagaggcagaaagcaatagaggagagacgggtg
gtgtacgtggggcgactgaggtccaactgcacccggacggagctgaagcgccgctttgaa
gtctttggcgaaattgaagaatgtgcagtgaacttgagggacgatggggacaattttggc
ttcatcacgtaccgctacacttgtgacgcctttgccgcccttgagaacggacacacctta
cgcaggtcaaacgagcctcagttcgagctgtgctttggcggacaaaagcagttctgcaaa
tcacattacacagacttggattcccattcggacgactttgatccagcctccacaaaaagc
aagtatgactccatggattttgacagcttgctgagggaggcccagcgcagcctgagaagg
taa
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