Seriola dumerili (greater amberjack): 111231596
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Entry
111231596 CDS
T05606
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111231596 (dennd4c)
Membrane trafficking [BR:
sdu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111231596 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_long
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
111231596
NCBI-ProteinID:
XP_022614464
LinkDB
All DBs
Position
Unknown
AA seq
1925 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINRSAGETVPEGFT
CIDSTYSGQQANLNHGSLKSPELFLCYKRARGKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSISFKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRDPLPVFSTFVLTISSGEKVYGSAIQFYEPYTADLLSEKQKIQLGLLTTVEKKMI
PNRPVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLNLSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLINSLSNLHHQLGTVSVRQTTQESSAV
DMTPIEADFTWHKKKTALEMEIQEAFLRFMASILKGYRSYLKPITQAPSEKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGESSEDTRLLELDESQKSEHTVFVMPPEPPADGGSDPTTRYTYKGFPRLQMDLF
DRPRVLRPALSSRAAGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWARCLFSHCY
SLWFICLPAAVRLAKSKSRAMQQAYNVLLKMRTTEVEVLDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVLRGVAQFKHALD
RTTSKKGPALSTTAASIGGSTVTDADRLSHGSADSSNEVNGEEHNLFAHGHGMEDTTENH
CSTGRQSDQGYGSKDELHQELAEPSHTAVLSAEERSNAKAQHNGGDIAGSVDSAVAVAEL
PSPVDVLSPVPSIVKLSTGSFDGETGAGKLFRRHSKNDNVSLPDDDASLASGDVASQPQQ
QRQKSFSERSCSFSAETRAGMLLEKGVDHMASQMGADARILTAALSAGQSPPPSCISKAL
FKDLEEEPEEDRGLILGKLPAEEEPGALEKGKGDENDVEGTEEKMEKQERKESEANEDES
GARGASLERADVEMGADPLSLLMSESEESASVTSQEPPRSMPAVVSRNLAEEIEMYMSLR
SPLGVKSSSMELQQSQADSTDAPQPKQSMERRSSLPVPPVKTSTGSSGDTPKHSPNTVTR
SKTFAAKTKTPGSTAASPGTRSSSLTALVKSSQGGSLGSVINSISGIKMDTLLSGPKIDV
LKSSMKQAANVASKMWGAMASAYSYSDDEDEQAQGGGGFPSRLDEHMFAAHDVDESPERG
AIPGLVANGLNQSCTSLGSSSGSSDTGRGTHQTHPTPGRAGRGPDSEQGSSHHASSSSIY
QNCALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNTNCPFCRTAFLPLLHVEFHDL
RTMTGFYMNPTSSGDSIHSTSTQPTASSSADIKPPDLISFPEEETRETPDNRPGAQKSLI
REPVQSDPLGLLEHHAAGKQQRCSGTSLTRSNSVGGPLQSLDYSQRPGHGVSTTSLPCSL
QEVSDGMGTKRPNPKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLV
WYFRRLDLPTHLPGLILTSEHCNNGVQLPLTSLSQDSKQVYVQLLWDNINLHQEHGDPLY
LLWRTLLEKKGTLAPTDHQEIRTLLNTIVRNIQTNDVYGPINLLIREIKRRPEGVKRQRS
IYREILFLSLVALGRENIDVEAFDREYRLAYDQLSAEQLKSLHRIDRPPTPSIQWCLKSF
GAPVI
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacagac
aagtccacgcccttggagcaggatctgtcagagaccaagtccagcgggcccaaagcgccc
atcacagacttggctgtcattaacaggtcggcgggagaaacggtgccagagggcttcacg
tgtatcgacagcacctacagcggccagcaagccaacctaaatcatggcagtctgaagagc
cccgagcttttcctgtgctacaagagggctcgagggaagcctcctctcattgacatcggg
gttctgtatgagggcaaggagcgcctgatccagggctgcgaggtcatccaggccacaccg
tacggccgctgcgccaacgtcaacaacagctcggccacctcgcagcgcatcttcatcacc
ttccgccgagcgccacccgtccagcctcagaattccctggcggtgacagacatttgtgtc
attgtcaccagcaagggtgagacacccccacataccttttgcaaagtggacaagaacctc
aactgtggcatgtggggctccagtgtgttcctgtgctacaagaaatcagtatctgcgtcc
aattccatcagtttcaaagctggtctaatctttcgttacccagaagaggactatgagtct
tttcctctctcggaatctgtccctctgttttgtctgcctatgggcgccaagatcgagtgt
tgggcaccgaacacacgcgaccccctgcctgtcttctccacgtttgtcttaaccatctca
tctggtgaaaaggtgtatggatcagccatccagttctatgagccatatacagcggatttg
ttgagcgagaagcagaagatccagctgggcctgctcaccacggtggagaagaagatgatc
cccaatcggcctgtaaacaccaacaaatgcatctgtcttctctcccgctggcccttcttt
gagtccttccgcaagttcctgatgttcctctacaaactttctgtctcaggcccgcaccca
ctgcctatcgaaaagcacatctcacacttcatgcacaatgtgtcgtttccttcccctcaa
aggcccaggatattggtccagctctcagcacatgacaccctgaacctctcccagcctgtg
tgtacacctttacccctcagcggggcagactacggcactctcctgatgaacctgggctca
gagaactgcgccacgctgctgcactttgtccttctggagagcaagatcctgctgcactcg
ctccggcccgctgtgctcaccggagtggccgaggccgtggtggctatgatctttcccttc
cagtggcagtgtccctatatcccgctgtgcccactctctctagcaggcgtcctcaacgct
ccttgtccattcatagtgggtgtggactcccgctactttgacctttacgaccccccacca
gatgttgtctgtgtggatctggacaccaacactatctacctgtctgacgagaagagacac
agcaactggaagaacctcccaaaaaagccctgcaagagcctcattaactcactgagcaac
ttgcaccaccagctgggcaccgtttcagtgcgtcaaacgacacaggaaagctcagcagtg
gacatgacccccatcgaggcggatttcacctggcacaagaagaagacggccctggagatg
gaaatccaggaggctttcctgcgcttcatggcctccatcctgaagggctaccgctcctac
ctcaaacccatcacccaggcgccttctgaaaaggccacagctgcagactctctctatgac
ctacaagggttcctcaaaagcagagaccgagcccaccagaagttctactcccaactcacc
aagacccagatcttcatccgcttcatcgaggagtgcacgtttgtcagtgacaaggacacc
ggtttggccttttttgacgattgcgtcgagaagctttttccctctgataaaatcaccgac
aagggcaccaaggttgaaggagagtcatcggaggacacacgactgctggagctggatgag
tctcaaaagagtgagcacactgtgtttgttatgccccctgaacctccagctgacggtgga
tccgaccccactactcgatacacctataaaggcttccccagactgcagatggatctgttt
gaccgtccaagagtgctacgaccggcacttagcagcagagcagcaggggccagtttgtcc
agcagccctgcactactggcaaagaggacgaagcaggagatcaagctagcctacaagatg
gcaaagcgcttctattccaaccctccgctgtgggcgcgctgtctgttcagtcactgctac
agcctgtggttcatctgcctgccagcagccgtgcggctggccaagtctaagagccgtgcc
atgcagcaggcgtacaacgtcctgctgaagatgaggaccacagaggtggaggtgctggat
gaggtgtgttacagagtggtaatgcagctctgtggtgtgtggggtcttcctgttatggct
gtgcgagtcctggttgagatgaagaaagctggagtacatcccaatgccatcacatatgga
tattacaacaaggctgtcttagagagcccgtggccgagccgaaaccgcagcggcctcttt
atgtggaccaagcttcgtaatgtgcttcgaggagtggcccagttcaagcacgctctggac
cgaacgacgtccaagaagggacccgcacttagtaccacagctgcatcaataggaggctca
acagtcactgatgctgaccgcttgagtcacggaagcgctgacagctcgaatgaggttaac
ggtgaggaacataacctatttgcccacggccacggcatggaagacacaacagaaaaccac
tgtagtacaggaaggcaatctgatcaaggctacggctccaaggatgagttacaccaggag
ctggcagagccttcacacacagctgtgctttcagctgaagagaggagcaacgcaaaagca
cagcataacggaggcgacattgccggctcagtggacagtgcagtagcagtagcagaactc
cccagtcctgttgacgtgctctcacctgtccccagtattgtgaagctgtccacagggagc
ttcgacggtgaaacgggtgcagggaagctgttcaggagacacagcaagaacgataatgtg
tctctccctgatgatgatgcctcactagcatcaggtgatgtggccagccagcctcaacag
cagcggcagaaatccttctccgagcgcagctgtagcttcagtgctgagactcgtgcagga
atgctcctcgagaaaggtgtggaccacatggccagccagatgggagccgacgctcgtatc
ctgactgcagcgctctctgcgggccaaagtccaccccccagctgtatatccaaagcactt
tttaaagatctggaggaagagcctgaagaagatcggggcttgatactcgggaagctgcca
gcggaagaggagccaggagcactggaaaaagggaagggagatgagaacgacgtggagggg
actgaggaaaaaatggaaaaacaagagaggaaggaaagtgaagcaaacgaggatgagtct
ggggcgcgaggagcgagtctggagagggcagacgtggagatgggtgctgacccactttcc
ctcctgatgtcagagagcgaagagtcggcctctgttaccagccaggagccgccacgctcc
atgcctgctgtggtgtcccgcaacctggccgaggagatcgaaatgtacatgagcctgcga
agccctttaggtgttaagtcctccagcatggagctccagcagtcgcaggcagattccact
gacgcgccacagcccaaacagtctatggagcgcaggtccagcctcccggtgcctcctgtt
aaaacctcaactggctcttcgggtgacacacccaagcatagccccaacactgttactcgc
tccaagacgtttgccgcaaagacaaagacccccggcagcactgcggctagcccaggtact
agatcgtcctcactgacggcgctggtcaagtcctcacagggagggtctctgggctcagtc
ataaactccatttcaggcatcaagatggacactctgttgtcaggacctaagattgatgtg
ctgaagtctagcatgaagcaggcagcaaatgtagccagcaaaatgtggggggcaatggcg
tcagcttactcctactcagacgatgaggacgaacaagctcagggtggtggtggcttcccg
tcgcgtctggatgagcacatgtttgccgcacatgatgtcgatgagagtcctgaaagaggc
gccatcccaggtttggtggccaacggtttgaaccagagctgcaccagcctgggcagcagc
agtggcagcagtgacacaggccgagggacccaccagacacatccaactccaggacgagca
ggcaggggtcctgactctgagcaaggctcctcacatcacgcttcctcctcgagcatctac
cagaactgtgcattggaggtgctgatgtccagttgctcccagtgccgctcctgtgaagct
ctggtgtacgacgaggagatcatggcgggctggacagccgacgactccaacctaaatacc
aactgccctttctgtcgcacagccttccttcccttactgcacgtcgagtttcatgacttg
cgcacaatgaccgggttctatatgaaccccacttcctcaggagacagtatccacagcacc
agtacccagcccacagccagcagctcagccgacattaagcccccagaccttatctctttc
cctgaggaggaaactagggagactccagataatcgtcctggagcacaaaagagtctgatt
cgagagccggtgcagtccgaccctctgggtctactggagcaccacgcggcagggaagcag
cagagatgcagtgggacgtcactgacacgcagcaacagtgttggaggtccactgcagagc
ctggactactcccagagacctggacatggtgtttccacaaccagcctgccctgcagcctg
caagaggtgtcggatggcatgggaaccaaacgaccaaaccccaagcctgtgtccgtaccg
tacctcagccccttggtgctgcgcaaggagctggagaccctgttggagaatgagggagat
caggtgatctacacccacaagttcctgagccagcaccccatcatcttctggaatctggtg
tggtatttccgtcgcttggacctgcccactcacttacctggtctcattcttacctctgaa
cactgcaacaatggagtacagcttcccctcacatcgctgtcccaggacagtaagcaggta
tacgtccagctcctgtgggacaacattaacctgcaccaggaacatggagatcccctctac
ctgctgtggaggaccctgttggagaagaaggggacattggctccaacagaccaccaggag
attcgtaccctcctcaacacaattgttcgcaacatccagaccaacgacgtctacggacca
atcaacctgctgatccgagagattaaacggcgtccagagggagtcaaacgacaaaggagc
atctatagagaaatactgtttctttcactggtggctttgggacgggagaacatcgatgta
gaggcctttgacagggagtaccgcctggcctacgaccaactgagcgccgagcagctcaag
tctttgcaccgcatcgatcgaccacccacccccagcatccagtggtgccttaaaagcttt
ggagctcctgtcatctga
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integrated database retrieval system
