Seriola dumerili (greater amberjack): 111231607
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Entry
111231607 CDS
T05606
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu02010
ABC transporters
sdu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111231607
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111231607
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111231607
Transporters [BR:
sdu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111231607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
111231607
NCBI-ProteinID:
XP_022614487
LinkDB
All DBs
Position
Unknown
AA seq
2230 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVIEMIWPLFLFFILVGVRSTNKPVHKGQCHYPNKA
MPSAGVLPWIQGMICNINNPCLSYPTPGETPGQVNNFNKSIIAGVLIELQTLLVNRSILS
KAQLLADDINQWASVLSQSNPGNGKRICPCTHEGHPQPVALRSILRDDETFSTHLTENLS
VPGTVTQSLINAKVYVNPMMGVPRPGNLRKILCEGTDLDEYVQFSSQAEKEAFQNVSCSL
TPQQLINTQQVLLQNLDVRKVLSEIARLQNSTIFKAARSLDFQEDMIGSVNMLLCGKQPD
FNSTNVTLSLDSPGQMPNSKSIFIMGNSSDAFCQTLVDTLEGTPGLRNIWSTFKPLVLGK
VLYTPDTPAARLIVKEANSTFNALAMLKELADLWDELGPRVWDFLQNSPQVNAIRALLAN
PVFAAALNQRLNGTGWTAEQLANFLYNGPPEDRPPGMPPYDWRDVYNTTTQILKLLSNFL
GCLDLNKFEAAPTEAHLVSKALELLKNDTYWASVVFGNLQPDASQPTPYVEYKIRMDIDE
VERTNKVKDRLWSPGARDKSFNDLRYIWGGFAYLQDMMDHGIIRVQTSKTQPLGVFVQQM
PYPCFVDDVFIQSIGGILPMFLVLAFMYTVCMTIKGLVLEKELRLKEVLRALGIQNSALW
SSRFTENIVLLTVPCLLISVSVKYGKVLQYSDPSVIFVFLLVFCVATITQCFFISVFFSK
ANLAAACGGFIYFVLYLPHILCYAWRDVMGFGAKVAVSLLSCVAFGYGCENFSKYEEQGI
GIQWYNIGKSPEEGERYTFIVSIIMMLFDAVFYWTLTWYIENVFPGQYGIPKPWYFPFTA
SYWCGRASVTDVDPGLLKDSRVHNEYLEKPPPNMKAGVSIRNLVKIYKTGKKLAVDGLSV
DFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIHTDMDRIRKYLGMCPQH
NVLFNELTVEEHIYFYARLKGLNRDEVKIEMDQMIKDVGLPHKRKDLAKNLSGGMQRKLS
VAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMDEADILGDRIA
IISHGKMRCSGSSLFLKKCFGSGYYLTLVRDGTEKMTTQRHGIIHSQATEEKDCPSRSSP
DDGIGSQSWNNSDPSDLTAVGQLVRRHVPEAVFLESIGQEINYILPYGGARDGTFELLFQ
ELDLAIADLGLTSYGISDTTLEEIFLKVAEDTGVDTEIQTTKEPLERDCKRSSRESKRNS
IASVHAAPGQVSGMTDKKERFKRKVEDLKRNASVSGRGSTVITGWQLIRKQFLALFIKRF
HHARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPNLELQPWMYDLPQTTFYSNDGP
DNVEVSRVAETLVNNPGFGTRCMDGNPIPKLPCSSAGSDWFTPTVDQSVTDIFLNGNWSM
SNPSPSCQCSTSKRTIMLPDCPPGAGGLPPPQRIQNTTDTLLNLTGWNMTDFLVKTFEHS
GKTRYGGISVGAVNSQVRLTEGVIEAVFRDLKDLFSSFQDNVTDQILQKSETLLKKLGTR
DNVKVWFYNQAWHGMVSFLSVANNAILRGSLPPGQNPRQYGISVSNHPLNLTKEQLSYAA
MATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPAVYWLANFAWDM
CNYIIPCLIVIVIFLCFQQKAYVSPPNLPALILLLILYGWSITPMMYPASFIFSVPSTAY
VVLTCINLFIGINGSVATFVMELFDDDNVSRINNIVKQVLLIFPHFCLGRGLIDMAQNQA
IATLFSSFGEDRFKDPLSWEMVGKNLCAMSIQGVVMFVITILIQYKFFCKPRLILGKSLS
AEEEDIDVARERDRVYEGKAENDLLRICDLTKVYPRKSTPAVDKLCVGVPAAECFGLLGI
NGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRDVHQNMGYCPQFDAINDLLTGREHL
EFYARLRGVPENEVTMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLSTAIALIGCPPVIF
LDEPTTGMDPKARRFLWDCILSVIREGRSVILTSHSMEECEALCTRMAIMVNGRFKCLGS
IQHLKSRFGDGYTVIVRVGGSPPALGPVEDFVQQTFPGSVLKEKHHNTLQYQLPYTQGAL
STIFSQFTSHQHRLGVEDYSVSQTTLDQVFVNFARHQHGEEDSQAYDNPVDTSDEKPLQS
VKTSQEGEKV
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcaattcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcgactggtcattgaaatgatatggcctctttttctcttcttcatactggtg
ggtgtgcggtccaccaataagccagttcacaaaggccaatgtcactaccctaataaggcc
atgccatcagctggtgtgctgccctggattcaaggtatgatctgtaacatcaacaatccc
tgtttgagttacccaacgcctggggagacaccgggccaggtcaacaacttcaacaagtcc
ataattgctggagtgttgatagagctgcaaaccctcctggtgaacagatctatcctcagc
aaggcacagttgctggcagatgatatcaaccagtgggcttcagtcttgtcacagtctaac
cctggtaatggtaagagaatatgcccctgcactcatgaagggcatcctcaaccagtggcc
ctgaggagtattctaagagacgatgaaactttctccacacatctgacagagaatttgtca
gtgccaggaacagtcactcaaagcctcataaatgcgaaggtttacgtcaatccgatgatg
ggcgttccaaggcctggcaacctcaggaagatcctgtgtgaggggacagatctggatgag
tatgtccaatttagcagccaagctgaaaaggaggcttttcaaaatgtcagctgctccctc
actccacagcagctgattaacacccagcaagtactcctgcagaacctggatgtgaggaaa
gtgctgtcggagattgccagattgcagaactccaccatcttcaaggctgctcgttcattg
gatttccaagaggacatgattggcagtgtcaatatgctactgtgtggaaaacagcctgac
ttcaattccaccaatgtgactctcagtttagactcacctggacagatgcctaacagcaag
tcaatcttcatcatgggcaacagttccgatgcgttttgtcagaccttagtcgacaccctg
gagggcacacctggtctgcgcaacatttggagcaccttcaagccgttagtgcttggcaaa
gtcctctacacacctgatacacctgctgctcgcctcattgtgaaggaagcaaacagcaca
ttcaatgccttggctatgttaaaggagctcgctgatttgtgggatgaacttgggccacgt
gtctgggatttcctccaaaatagtcctcaagtgaatgcaatacgggctttgctggcgaac
ccagtgtttgctgctgccctcaaccagcgtctcaacggcacaggatggacggccgagcag
ctggccaacttcctctacaatgggcctcctgaggaccgtccacccggcatgccgccctac
gactggcgggatgtttacaacaccactacacagatcctgaagctcctctccaacttcctt
ggttgtttagacctgaataagtttgaggcagcccccactgaagcccatctggtgagcaaa
gcactggagcttctgaagaatgatacgtactgggccagtgttgtctttggaaacctccaa
cccgacgccagccaacccactccttatgtcgagtacaaaatccgcatggacatcgatgaa
gtagagcgtacaaacaaagtgaaagacaggttatggtctcccggggcccgagacaaatcc
tttaacgacctgcgctatatatggggaggcttcgcctacctgcaggatatgatggaccat
ggcattatacgagtgcaaacgtcaaagacccaacccctcggtgtttttgtccagcaaatg
ccatacccttgtttcgtggatgacgtcttcatccagagtattggaggcatcctccctatg
ttcctggtgctggccttcatgtacactgtgtgcatgaccatcaaaggtctggtgctggag
aaggaactgcggctcaaggaagtgctgcgtgctcttggcattcagaacagcgccctttgg
tcttcaaggttcacagagaacattgttctgctcacagttccgtgtttacttataagtgtc
agtgttaagtatgggaaagtgctgcagtacagtgacccctcagtaatctttgtcttcctg
ctggtgttctgtgtggccaccatcactcagtgcttcttcattagcgtcttcttctctaag
gccaacttagcagcagcgtgcggtggcttcatctactttgtcctctatctgccgcacatc
ctctgctacgcctggagggacgtcatgggtttcggggccaaggttgctgtgagtttactg
tcttgtgtggcctttggctacggctgtgagaacttttccaagtacgaggagcaaggcatc
ggtattcagtggtacaacattggcaagagtccagaagagggcgaacgctacacgttcatt
gtgtccatcatcatgatgctctttgatgctgttttttactggacgctcacctggtacatt
gagaatgtctttccaggccaatatggaatccctaagccatggtactttcctttcactgca
tcttattggtgtgggagagcttcagtgactgacgttgaccccggtttgctgaaggactcc
agagtacataatgaatatctggagaagccaccacccaatatgaaagcgggggtctcaatc
cgcaatcttgtcaaaatttacaagaccggaaagaagcttgctgtggatggactaagcgtg
gacttctacgagaatcagatcacatcttttcttggccacaatggagctggaaaaacaacc
acaatgtcaattctgacaggactgttcccgcctacatcaggcacggccctcatcaatgga
tatgacatccacactgacatggacagaatccggaagtatttgggaatgtgcccacagcac
aatgtcttatttaatgagctgacagtggaggagcacatctacttctacgctcggctgaaa
ggactcaaccgtgatgaggtgaaaattgagatggaccagatgattaaggatgttggttta
ccacataagcggaaggatcttgctaagaacctgtcaggtggcatgcagaggaagctgtcc
gtggctatagcatttgttggcggctcaaaaatcgtcatcttagatgaacctacagcagga
gtggacccctatgcccgcaggggtatatgggaactgctgttaaagtacaaacaaggtcgc
accatcattttgtccactcatcacatggatgaggcagacatcttaggtgatcgcatagcc
atcatctcccacggcaagatgcgctgctctggctcctcactcttcctaaagaaatgtttt
ggcagcggctactacctcactctggtccgagatgggactgaaaagatgacaactcaacgc
catggtattatacacagccaggccacagaggagaaagactgtccttcgaggagcagccca
gatgatggcattggcagccagagctggaacaactctgatccctcagatttgacagctgtg
ggtcagcttgtgcgacgccatgtccctgaggcagtcttcttggagagcatcggtcaggag
atcaactacatactgccctatggtggggccagagatgggacctttgagctgctcttccaa
gagctcgacctggccattgctgacctcggcctgaccagctacggcatctctgacaccacg
ctggaggagatatttctgaaggtggcagaagataccggagtggacacagaaatacaaaca
acaaaggagccgttggagagagactgcaagagaagctcccgcgaatccaagcggaacagc
atcgccagcgtccacgctgcaccaggtcaagtctctggaatgactgacaaaaaggaaaga
tttaaaagaaaagtggaagacttaaagaggaacgccagtgtcagtgggaggggatccacg
gtcatcaccgggtggcagctgatcaggaagcagttcctggcgctctttatcaagcgcttc
caccacgcccggaggagccgcaagggactcattgcccaggtggtcttgccggccgttttt
gtgtgcctgtctctcatcttctcactcatcgtcccgcctttcactgaatatcccaatctg
gagctgcagccctggatgtatgatctgcctcagaccacattttacagcaatgatgggcca
gataatgtggaggtgtctcgggtggcggaaaccttggtgaacaaccccggctttgggacc
cgctgcatggacggaaaccctataccgaagttaccatgttcctccgctggatcggattgg
ttcactccaaccgtagatcagtcagtcacagacatcttcctcaacgggaactggagcatg
tctaatccctccccctcctgtcagtgcagcacgtctaaacggacgatcatgttacctgac
tgtccgcctggtgcgggagggctcccaccacctcagaggatccagaacacaacagacaca
ttgctgaatttaactggatggaacatgacagacttcttggtcaaaacttttgagcactct
ggtaaaacaaggtacggggggatctctgtcggagcggtcaactcccaagtccgtctaact
gagggagtgatcgaagctgtattcagggacctcaaagacctcttcagttcatttcaagat
aatgtgactgatcagatcttacagaagtcggagacgctgctgaagaaactgggaaccagg
gacaacgtaaaggtgtggttctacaaccaggcatggcacggcatggtgtctttcctcagt
gttgccaacaacgccatcctgaggggaagtctgccaccagggcagaatccccgccagtac
ggcatctctgtgtccaatcaccccctcaacctcaccaaggagcagctctcctatgcggcc
atggccacaacctccactgacgtggtggtgtccatctgcgttatctttgccatgtccttc
atccctgccagctttgtcctcttcctcatccaagagcgggtgaacaaagccaagcatctg
caatttgtcagtggagtaaacccagctgtatactggttggccaattttgcctgggacatg
tgtaactacatcatcccgtgcttgattgtgattgtgatcttcctctgcttccaacaaaaa
gcctatgtttcccctcccaacctgccagctctgattctgctgcttattctgtatgggtgg
tccatcacccccatgatgtatcccgcctccttcatcttcagtgtgcccagcacagcctac
gtggttctgacctgcatcaacctctttattggcattaacggcagcgtggccacctttgtt
atggagctctttgacgatgataatgtgtcccgcatcaacaatatcgtgaagcaggtgctg
ctgatattcccacatttctgtctgggcagagggcttattgacatggcccagaaccaggca
atagccaccctcttcagcagttttggggaggaccgtttcaaggatccactcagctgggaa
atggtgggaaagaacctttgcgccatgtccatccagggagttgtcatgtttgtcatcaca
atcctcatccagtataagttcttctgcaaaccaaggcttattttagggaagtcattatct
gcggaggaggaggatatcgatgttgcccgtgaacgtgaccgagtgtatgaaggcaaagct
gagaatgaccttctgaggatctgtgacctcactaaggtttaccctcggaagagcacccct
gctgtggacaagctatgtgtgggcgtacctgccgcagagtgttttggcttgctgggaatc
aatggggctgggaaaaccaccacattcaagatgctgacaggagacatcccggtctctagt
ggagaggccttcctaaatggatacagcatacgaacagaaatgagggatgtgcaccagaac
atgggctattgtccccagtttgatgctatcaatgacctgcttactggacgagaacatctg
gagttttacgcaaggttacggggggtacctgaaaacgaggtcaccatggtggccgagtgg
gggatccaaaagttggggctggtcaaatattccaacaagtccgcgggaacctacagcggt
gggaacaaacgtaaactctctactgctatagccctgatcggttgtcctccagtgatcttt
ctggatgagccaaccactgggatggaccccaaggcccggcgcttcctgtgggactgcatc
ctcagtgtcatcagggagggacgttcagtcatcctcacatcacacagtatggaggagtgt
gaagccctgtgcacacgcatggccatcatggtaaacggtcgcttcaagtgtctcgggagc
atccagcatctgaagagcagatttggtgatggctacacagtgatcgtgagggttggtggc
tctcctcctgccttggggccagtcgaggactttgtccagcagaccttcccaggcagtgtc
ctgaaggagaagcatcacaacacgctgcagtatcagctgccatacacacagggagctttg
tccaccatcttcagccagttcaccagccatcagcacaggctgggtgtggaggactactct
gtgtcccagacaactctggatcaggtttttgtgaattttgcgaggcaccagcacggagaa
gaagactctcaggcctacgacaacccggtggacacttctgatgagaagccactgcagtct
gtgaagacctcccaagaaggagagaaggtgtaa
DBGET
integrated database retrieval system
