Seriola dumerili (greater amberjack): 111231660
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Entry
111231660 CDS
T05606
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04137
Mitophagy - animal
sdu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111231660 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111231660 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111231660 (vcp)
03009 Ribosome biogenesis [BR:
sdu03009
]
111231660 (vcp)
04131 Membrane trafficking [BR:
sdu04131
]
111231660 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdu04147
]
111231660 (vcp)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111231660 (vcp)
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111231660 (vcp)
Membrane trafficking [BR:
sdu04131
]
SNARE
SNARE associated proteins
Others
111231660 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111231660 (vcp)
Exosome [BR:
sdu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111231660 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
111231660
NCBI-ProteinID:
XP_022614592
UniProt:
A0A3B4UP87
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLAEDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSATGG
SGPSHGSGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggggaatccaaaaatgatgatctagccactgcaattctgaaacagaag
aacagaccgaacagactgattgttgatgaatccatcaatgaagacaacagtgtggtctct
ctctctcagaccaagatggacgagctgcagctcttccgtggagacacagtgctgatgaag
ggaaagaagaggcgggagactgtgtgcattgtgctgtcagatgacacctgttctgatgaa
aaggttcgcatgaacagggtggtccgcaacaatctgagggtccgtctgggtgatgtcatc
agcattcagccatgtcctgatgtgaagtacggaaagaggatccacgtcctcccaatagat
gacacagtagaaggaattactggaaacctgtttgaggtctatctgaagccatacttcttg
gaggcatacaggccaatccgcaaaggtgatattttcctggtcagaggtggcatgcgtgct
gtggagttcaaggtggtggaaactgatccttccccctactgcattgttgctcctgataca
gtcatccactgtgagggagaaccaatcaggagagaggatgaggaagagtccctgaacgag
gtgggctatgatgacattggaggagtgagaaagcagttggctcagatcaaagagatggtg
gagcttcctcttagacaccctgcactgttcaaggccatcggagtcaagcccccacgtgga
atcctgctgtatggaccccctggaactggaaagaccttgattgccagagccgtggcaaat
gaaactggagctttcttcttcctgattaatggtcctgagatcatgagcaagctggcagga
gagagtgagagtaacctgagaaaggccttcgaggaagcagagaagaatgctcctgccatc
atctttattgatgagcttgatgcaatcgctcctaagagagagaagactcatggagaggtg
gagaggcgcattgtttctcagctgctgactcttatggacggcctgaaacagagagctcat
gtcatcgtcatggctgccaccaacagacctaacagcattgacccagctctcaggagattt
gggcgttttgatagggaagtggacattggcatccctgatgccactggcagattggagatt
cttcagattcacactaagaacatgaagctggctgaggatgttgacttggaacaggtagcc
aatgagacccatggacatgtgggagcagatctggctgccctctgctctgaggctgccctg
caggccatcaggaagaagatggacctgattgaccttgaggatgagaccattgacgctgaa
gtcatgaactcgcttgctgtcaccatggatgacttcaagtgggccctgagccagagcaac
ccatcagcactgagggagacggttgttgaggtccccaacatcacctgggaggatatcgga
ggtctggaagatgtcaagagggagctgcaggagttggtgcagtatccagtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaagggtgtgctgttctatggcccccct
ggttgtggtaagactctgctggccaaagccatcgccaatgagtgccaggcaaatttcatc
tccatcaaaggacctgagctgctcaccatgtggtttggagagtctgaggccaacgtcaga
gagatctttgacaaggctcgtcaagcagccccatgtgttctcttctttgatgagctggac
tccatagccaaggcccgtggtggcaacgttggagatggtggtggagcagccgaccgtgtc
atcaaccagatcctgactgagatggatggaatgtccagcaagaagaacgtcttcatcatc
ggagccacaaacagaccagacatcatcgaccctgccattctgagacctggccgtcttgat
cagctcatttacatccccctgcccgatgagaagagcaggatcagcatcctgaaggccaac
ctccgcaagagtcccatcagcaaggatgtggacttggacttcctggccaagatgaccaat
ggtttctctggagctgatcttacagagatctgccagcgggcatgtaagctggccatcagg
gagagcatcgagaatgagatccgcagagagagggagaggcagaccaacccatcagctatg
gaggtggaagaggacgatcctgtgccagagatcaggaaggaccactttgaagaggcaatg
cgatttgctcgtcgctccgtcagtgacaatgacattcgcaaatatgagatgtttgctcag
acactgcagcagagccgtggctttggcagcttcaggtttccttccagtgccacaggtggc
agcggtccaagccatggctcaggaggaactggcagcggtccagtgttcaatgaagataac
gacgatgacctttatggataa
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