Seriola dumerili (greater amberjack): 111231662
Help
Entry
111231662 CDS
T05606
Name
(RefSeq) transcription factor SOX-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111231662
Transcription factors [BR:
sdu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111231662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Cwf_Cwc_15
NOA36
Autophagy_act_C
DUF4611
RXT2_N
Motif
Other DBs
NCBI-GeneID:
111231662
NCBI-ProteinID:
XP_022614590
UniProt:
A0A3B4URP0
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MVQHTQHGGAGINTGSREATDPEESELLAASACSPVPLKPDWCKTASGHIKRPMNAFMVW
SKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDTEKIPFIREAERLRLKHMADYPDYKYR
PKKKPKTDGCAFPAGKSAAQSPEKTAVRAVNKNSSAAKKFSKLKPSKPVVGPGRGRSHLQ
QHQHPDPRYRYVLTTSFKTSKLVKREFTDDEEDDDDDDDDDEDDSEEERGLKEDEPSRYS
LAKVPASLSLSSPAAEPEGTGMYESSGRLFYSFKNITRQGTSTSSYPASRSPASSSRSGS
TSSSCCGEDLDDLPSEGNDYAFSLLAGFHASSEPWNSSSSSVPGNLSLSLVDKDLDSCSS
EGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcacacgcagcatggcggggcggggatcaacaccgggtcccgcgaggcgacc
gacccggaggagagcgagctgctggcggcctcggcgtgcagccccgtgccgctgaagccg
gactggtgtaagacggcgtcgggtcacattaaacggcccatgaacgccttcatggtctgg
tccaagatcgagaggcggaagatcatggagcagtccccggacatgcacaacgcggagatc
tccaagcggctcgggaagcgctggaaaatgttaaaagacaccgaaaagatcccgttcatc
cgggaggcggagcggctccggctcaagcacatggccgactacccggactacaagtaccgg
cccaagaagaagcccaagacggacggatgtgcgtttcctgcggggaagtcagccgctcag
tccccggagaaaaccgcagtccgagccgtgaataagaactcctccgccgcgaagaaattc
tccaagttgaaacccagcaagccggtggtgggtcccggcagaggcaggagccacctccag
caacaccagcacccggacccccggtaccggtacgtgttgaccaccagctttaaaaccagc
aagctcgttaaacgggagttcaccgacgacgaggaggatgacgacgacgacgacgacgac
gatgaagacgactccgaggaggagcggggtcttaaggaggacgagccgtcccggtacagc
ctcgccaaggttccggccagcctgagtctgagctcccccgccgccgaaccggagggaacc
ggcatgtacgagtcttccggtcggctcttctacagcttcaagaacatcacccggcagggc
accagcacctcctcttacccggcctcccgctcacccgcatcctcgtcccggtccggctcc
acctcctcctcctgctgcggggaggacctcgatgatctcccctcggaggggaacgactac
gccttcagcctcctggccggcttccacgcctcctccgagccgtggaactcgtcttccagc
tcggtcccggggaacctgagcttgtccctggtggataaagacttggactcgtgcagcagc
gagggcagcctcgggtcccacttcgagttcccggactactgcaccccggagctcagcgag
atgatcgccggggactggctggaggccaacttctcggacctggtgttcacttattga
DBGET
integrated database retrieval system