Seriola dumerili (greater amberjack): 111231761
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Entry
111231761 CDS
T05606
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111231761 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111231761 (smg7)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111231761 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
111231761 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
111231761
NCBI-ProteinID:
XP_022614718
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQSNTSAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKAFIKFHGHVYLSKSLDKLDGLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLTADGSEQSYSSEQQISWFQLLGLFMSFLGVMCSRVLLNKNRGEEIMGECP
LPAIKVSLDWLKLRPSVFHEAAVDQRQHVWPWLVSILNSFHPKEDDVSCSSVTPLPEEFE
LQGFLALRPALRSLDFTKGHQGILVDRDGLPVHTRHQRLVSLGKWVADNQPGLIQCRVSE
DGLLVFITDIPEQAIEEPQEKEAPVLQESSNGEQTPNDGGNSGLKSVLSAGKTQSSWPDG
SDRPVVTFKENIKPREQSREPMRNHHQKDGGGKERSRDFAKGNGAAGKGELKRDGKRKSE
LKKTGHEKTTDAGKQVKAQVELRKTPVSEAKKTPVTQTQTTCSSQFIPIHHPGAFPPLPS
RPGFPTSAYVIPPPVAFPGLQVNPGFTFSTGVSVPGPFLQQAVHTQAGTQVQAGKQSHIP
YSQQRPSGPGPGQGPGSSGQGPGPMNQGPSQGQQPQAQPPSQQALQQSVQLQVQAMSQQQ
QSPTKPVQQVGMGKSPPHHPGLQQQYMQVQDQPAQMWNQAQAALQKMNPMQMSMKQQQPP
QQQPPAFYMAPQDPLKLYEHQLQPPSQLSMDKKIKYPDVKMQDFYWEPSYRMGDGLAVMA
DRMKRPPPGGICSEQDASAGPRGPPFEDNKSSPLLPPDLLKTLADFEEEEELIFTKPPDF
FQALAGPLSTAPGPNIFLPNQTRMESGPEVVSQSSSLLPMPGFPMQEYNQNSIFSQAYGK
NLPPSSKPDAPMVHQEPSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPT
HNHGAMPFSNFGPIGTPDSRDRRVVDRWKADKTGQVSGFGLDYLPAAASSAASDTSWHQT
GPTGSSWTNQESPMEESSSTVLLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHGAM
NPPH
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccagtatctacgacaggcagaggccctgaaggctgacatgacagat
tctaagctgggggcggcagaggtgtggacgtcccggcaggccctgcaggacctgtaccag
aagatgctggtgaccgacctggagtacgctctggacaagaaggtggagcaagacctgtgg
aatcatgcatttaagaaccagatcaccacgctgcagagccaggccaagaaccgagccaac
cccaaccgcagcgaggtccaggccaacctgtcgctgtttctggaggcagctagtggcttc
tacacacagttactgcaggagctgtgcaccgtcttcaacgtggacctgccgtgtcgcgtc
aaatcctctcagctcggcatcatcagcaataaacagagcaacaccagcgccatcgtcacc
ccgcagcccagctcctgctcctacatctgccagcactgcctcgtccacctcggagacatc
gcgcgttaccgtaaccagaccagccaggccgagtcttactaccgacacgcagctcagctg
gttccatccaatggtcagccgtacaaccagctggctatcctggcctcctctaaaggagac
cacctcaccaccatcttctactactgccgcagcatcgcagtcaagttccccttccccgca
gcctccaccaacctgcagaaggccctgtccaaggctctggagagtcgcgacgaggtgaaa
accaagtggagcgtgtccgatttcatcaaggccttcatcaaatttcacggtcatgtctac
ctgagcaagagtctggacaaactggacgggctgagggagaaactggaggagcagttccag
aggctgatcctgcagaaagccttcagctctcagcagctggtccacatcacagtcatcaac
ctgtttgagctgcaccacctcagagacctgacggccgacggcagtgagcagagctacagc
agcgagcagcagatcagctggttccagctgctcggactcttcatgtccttcctgggcgtc
atgtgcagccgtgtcctgctcaacaagaacaggggggaggagatcatgggggagtgtcct
ctgccggccatcaaagtctctctggactggctcaaactgagacccagcgttttccacgag
gccgccgtcgaccagaggcagcacgtttggccctggctcgtctccatcctcaacagtttc
caccccaaagaggacgacgtgtcctgttcctcagtcacacccctgccggaggagtttgag
ctccagggtttcctggctctgcggcccgctctgaggtctctggacttcactaaaggtcat
cagggaatcctggtggacagagacggtctgccggtccacactcgccaccagaggctcgtc
agtctgggcaagtgggtggccgacaaccagccggggctgattcagtgcagagtgagcgag
gacggtctcctcgtcttcatcactgacattccagagcaggccatcgaggagccgcaggag
aaggaggcgccggtgctgcaggagtcgtccaacggcgaacagacgcccaacgacggcggg
aactcgggcctgaagtcggtgctgtcggcggggaagacgcagagctcgtggccggacggg
agcgaccgacccgtcgtcaccttcaaggagaacatcaaaccccgagagcagagccgcgag
ccgatgcggaaccatcatcagaaggacggcggcggcaaagagcgcagcagggacttcgct
aagggtaacggggctgctgggaaaggagagctgaagagggacgggaagaggaagagcgag
ctgaagaaaaccggtcacgagaaaacgactgatgctggaaaacaggtgaaggctcaggtg
gagctgaggaagactccggtgtctgaggcgaagaagacgcctgtcactcaaactcaaacc
acctgctcctcccagttcatccccatccatcatcctggagccttccctccactgcccagc
cgacctggtttccccacctcggcctacgtgatccctcctccggtggcgttcccggggctc
caggtgaatccgggcttcaccttctccaccggcgtgtccgtccccggacccttcctgcag
caggcggtccacacccaggccggcacgcaggtccaggccgggaagcaatcccacattccc
tacagtcagcagaggccctctgggccgggtccgggtcaggggccgggctcctcgggacag
ggcccgggccccatgaaccagggcccctcccagggacagcagccccaggcccagccgccg
tcccagcaggccttgcagcagtcggtccagctgcaggtgcaggcaatgagccagcagcag
cagtctcccaccaaaccggtccagcaggtcgggatggggaagagtccacctcaccacccg
ggactacagcagcagtatatgcaggtccaggaccagccggctcagatgtggaaccaggcc
caggcggccctgcagaagatgaatcccatgcagatgtcaatgaagcagcagcagccgccg
cagcagcagccgccggccttctacatggcgcctcaggatcctctcaaactgtacgagcac
cagctgcagccgccctcacagctcagcatggacaagaagatcaagtaccccgacgtcaag
atgcaggacttctactgggagccgtcctacaggatgggcgacggtctggccgtgatggcg
gacaggatgaagaggcccccgccgggtgggatctgctcggagcaggatgcctctgccggg
ccccgggggcccccgtttgaggacaacaagagctcgcctcttctacctcctgacctgtta
aaaactctagcagattttgaggaggaggaggagctcatctttactaagcctcctgatttc
ttccaggccttggccggccctcttagcactgctcctggaccaaacatatttctgccgaat
cagaccaggatggagagcggccctgaggtcgtcagccaatcatcttctctgctgcccatg
cccggcttccccatgcaggagtacaaccagaacagcatcttcagtcaggcctacggcaag
aacctgccgcccagctccaagcccgacgctcccatggtgcaccaggagccgtccctctac
tccctctttgaagggactccctggtccccctcgctccccgccagctcagaccactccacc
ccggccagccaatcccctcactcctccaaccccagcagcctgccctcctcccccccaaca
cacaaccacggagccatgcccttctctaacttcgggcccatcggcactccggacagccgg
gaccgcagggtagtggaccgctggaaggccgacaagaccggtcaggtgagcgggttcggt
ctggactacctgccggctgcagcctcctctgcagcttcagacaccagctggcaccagacc
ggaccgaccggcagctcctggaccaatcaggagtctccgatggaggagtcgtcgtccact
gtgctgctcgacagcctcaagtccatctggtcgagctccatgatgcagccgggcccgtcg
gcgctggagcagctcctcctgcagcagaagcagaagcagcagcgaggtcacggcgccatg
aacccgcctcactga
DBGET
integrated database retrieval system
