Seriola dumerili (greater amberjack): 111231774
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Entry
111231774 CDS
T05606
Name
(RefSeq) cGMP-gated cation channel alpha-1-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111231774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111231774
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111231774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLZ
Ion_trans
cNMP_binding
CAF1A_acidic
CDC45
Nop14
Tim54
NPR3
Sec62
Piezo_TM1-24
Zip
Mat89Bb
PIP5K
FancD2
Pannexin_like
CLN3
Hamartin
MDM10
RR_TM4-6
Neur_chan_memb
ADI
GmrSD_N
SLC12
DUF2126
Motif
Other DBs
NCBI-GeneID:
111231774
NCBI-ProteinID:
XP_022614732
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MAKVAPLGPPSTSTLTPPTIVLQDMEEESGDVREGDRAAQRAGAGVLFNVNNSNNNEEEE
DEKKKKKKEKKEKKERKEKKEKEKQEKKERKEKKKKEKEEKEKEKEKEKEKKEKEKKAKE
EAPKEITVIDPAGNTYYHWLFIITIPVMYNWTLIIARMLEFFQRTETRTNYPNALRISNL
VMMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAIGFGSDRFVYPDPK
DPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYIFVVTDFLVGVLIFATIVGNVGS
MITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVLKYLP
DKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYI
IKEGKLAVVADDGVTQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSK
DDLMEALKEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEIEEKVERMTSTLDILQ
TRYARLLAEHEATHSKLKHRVTRLERKLPLPPRADQPGDAPPPPTPEPTK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtggctccactaggcccgccctccacctccaccttaactccgcccaccatc
gttctacaagacatggaggaggagtcaggtgacgtcagggagggggacagagcggctcaa
agagcaggagcgggagttctgttcaacgtcaacaacagcaacaacaacgaggaagaggag
gacgagaagaagaaaaagaagaaagagaagaaagagaagaaagagagaaaagagaagaag
gagaaggagaagcaggagaagaaggagaggaaggagaagaaaaagaaggagaaggaggag
aaggagaaagagaaggagaaagagaaagagaagaaggagaaggagaagaaggccaaagag
gaggcccccaaagagatcacagtgatcgacccggcaggaaacacctactaccactggctc
ttcatcatcaccatccccgtcatgtacaactggaccctgatcatcgccaggatgctggag
ttcttccagaggacggagaccaggaccaactaccccaacgctcttcgtatctccaacctc
gtcatgatgctggagttcttccagaggacggagaccaggaccaactaccccaacgctctt
cgtatctccaacctcgtcatgtacatcgtcatcatcatccactggaacgcctgcctctac
tactccttctccaaggccatcggtttcggctctgacaggttcgtgtatcccgacccaaag
gatccagagtttggtcgcctggtgaggaagtacgcctacagcatgtactggtccacgctg
acgctcacgaccatcggagaaacgccgccccctgtggagaactcagagtacatcttcgtc
gtcactgacttcctggtgggtgtgttgattttcgccaccatcgtcggtaacgtcggctcg
atgatcaccaacatgaacgctgccagagccgacttccaggctcgcatcgacgccatcaaa
cagtacatgagcttccgaaaggtgacgaaggacctggagaaacgagtcatcaagtggttt
gacttcctgtggaccaataagaaagcagtggacgagcgggaggtgctgaagtacctgcct
gacaaactgagagccgagatcgccatcaacgtccacctggacactctgaagaaggtgcgt
atctttgcggactgcgaggccggtctgctggtggagctggtgctgaagctgcagcctcag
gtctacagcccgggagactacatctgtaagaagggcgacatcggcagagagatgtacatc
atcaaggagggaaaactcgctgttgtcgccgacgatggcgtcacgcagtttgtggttctg
agcgatggaagctactttggcgagatcagcatcctggctattaaaggcagtaaggcggga
aacaggaggacggcaaacatcaggagcatcggctactccgacctcttctgtctgtccaaa
gacgacctgatggaggcgctgaaggagtatcctgacgccaaggctctgctggaggagaag
ggacggcagattctgatgaaggacggactgctggacctggaggtggcagcgcagggcccc
gaccccaaagagatcgaggagaaggtggagcggatgacgagcacgctggacatcctgcag
acgcggtacgcgcggctgctggccgagcacgaggccacgcacagcaaactcaaacacaga
gtcacgcggctggagaggaagctgccgctgccgccgcgcgccgaccagccgggcgacgcc
ccgcccccgcccacacctgagccgaccaaataa
DBGET
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