Seriola dumerili (greater amberjack): 111231992
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Entry
111231992 CDS
T05606
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04136
Autophagy - other
sdu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111231992 (atg4b)
04136 Autophagy - other
111231992 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111231992 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111231992 (atg4b)
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111231992 (atg4b)
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
111231992 (atg4b)
Membrane trafficking [BR:
sdu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111231992 (atg4b)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111231992 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
111231992
NCBI-ProteinID:
XP_022615031
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSEPVWILGKEYNALTEKDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWARDQKQREEYISILNAFIDKKD
SYYSIHQIVVLTSLNAAAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMD
NTVVIEEIKRLCMPWLDVAGEAEGMGELNGCLEGACALAEEETALWKPLVLLIPLRLGLS
DINEAYIETLKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQ
VPDETYHCQHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRLRRLSCKRGGLPMFELVD
SQPSHMVSVDALNLTPDPLSFADFSDSDRLERFFDSEDEEFEILSL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctaccttgacatacgacacacttcgctttggagagtttgaagattttcct
gagacctcagagcctgtgtggatcttagggaaagaatacaatgcactcacagagaaagat
gagattttatcagatgtcacttcacgactgtggttcacatacagaaaaaacttccccccc
attggtgggacaggaccaacatcagatacgggatggggatgtatgttacggtgcggacag
atgatcctgggcgaggccttggtgtgtagacatttaggcagagactggagatgggccaga
gaccagaaacaaagagaagagtacatcagtattctcaacgccttcattgacaaaaaagac
agctattattccatccatcaaattgttgttcttacgtctctaaatgctgcagcccaaatg
ggagttggagagggaaagcctataggccagtggtatggaccaaacacagtcgcccaggtt
cttaagaagctggcagtgtttgatacgtggagcagattagtggtacacgtggcgatggac
aacactgtggtcatcgaggagatcaagcgtctctgtatgccctggctggatgttgcagga
gaagcagagggaatgggggagctcaacggctgccttgagggcgcatgtgccctggctgag
gaggagacggctctctggaaacctctggtactgctcatccccctcaggctgggcctgagt
gatataaatgaggcctacattgaaaccctcaagcaatgcttcatgctgcctcagtccctg
ggtgttattgggggaaaacccaacagtgcccattacttcattggttatgtcggagaggaa
ctcatctatttagacccacacaccacacagcctgcagtggagccgtgtgaagacagccag
gtccctgatgagacgtaccattgtcagcacccaccctgtcgtatgcacatctgtgagctg
gacccatccatcgcagcgggtttcttctgcagaacagaggacgagtttgatgactggtgt
atgcgcttaagaaggctgtcctgcaaaagagggggcctgcccatgtttgaactagtagac
agtcagccgtctcacatggtcagcgtggatgcccttaaccttactcctgatcccctttcc
ttcgcagatttctcggactcggaccggttggagcggttctttgactcagaagacgaagag
tttgagatcctctccctgtga
DBGET
integrated database retrieval system
