Seriola dumerili (greater amberjack): 111231996
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Entry
111231996 CDS
T05606
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03030
DNA replication
sdu03410
Base excision repair
sdu03420
Nucleotide excision repair
sdu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111231996 (rfc4)
03410 Base excision repair
111231996 (rfc4)
03420 Nucleotide excision repair
111231996 (rfc4)
03430 Mismatch repair
111231996 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdu03032
]
111231996 (rfc4)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111231996 (rfc4)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111231996 (rfc4)
DNA replication proteins [BR:
sdu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111231996 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
111231996 (rfc4)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111231996 (rfc4)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111231996 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
111231996 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
Gp44_lid
DUF815
AAA_24
Mg_chelatase
AAA_19
RuvB_N
AAA_28
AAA_14
SLFN-g3_helicase
Cdc6_lid
DNAX_ATPase_lid
ResIII
AAA_5
AAA_7
wHTH-PRTase_assc
Motif
Other DBs
NCBI-GeneID:
111231996
NCBI-ProteinID:
XP_022615041
UniProt:
A0A3B4VLH7
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MQAFLKGATVHSTRPQKDKAAAGPSTEKKAKAVPWVEKYRPKSVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVVREKVKN
FAQLTVAGTRSDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEQRLLQICDKENLKYTKESIAALVKVSEGDLRKAITFL
QSAARLNSDKEITERAVIEIAGVVPPKMIDNLLQICFKGTFEKLEVAVSNMVDEGYAATQ
ILSQLHESIIEQDLSDKEKSAITEKMAVVGKCLADGADEYLQMLSLCSVIMQQASQNSS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagcaactgttcactctaccagacctcagaaagacaaggca
gcagcagggcccagtacagagaagaaagccaaggctgttccttgggtagaaaaatacagg
ccaaagtctgttgatgaggtagcctttcaggaggaggtggtagcagtgctgaagaagtct
ctggaaggagcagatcttcccaacttgcttttctatggccctcctggaacaggaaagacc
tccaccatcttagctgctgccagagaactttatggtccagagctgttcagacagagggtg
ctggagctcaacgcctcagatgaacgcggcatccaggttgtcagagagaaggtcaagaac
ttcgctcagctcaccgtggctggaactcgctcagatgggaagccatgtcctccttttaag
atcatcatcctggatgaggcagactctatgacagcaccagctcaggctgcgctcagacgg
accatggagaaggaatcgcgcaccacccgcttctgcctcatctgtaactacatcagcagg
attattgaacctctgacctccagatgttccaagtttcgcttcaaaccccttgccaatcag
atccaagaacaacgcctgcttcagatctgtgacaaggagaacctcaagtacaccaaagag
agtatagcagcattggtgaaggtgtctgagggagacctgcggaaagccatcaccttcctc
cagagcgctgcgcgcctcaacagcgacaaggagatcacagagcgtgctgtcattgaaata
gccggggttgtccctccaaagatgatcgacaacttgctccagatctgcttcaaaggaaca
tttgagaaactggaggttgcagtcagtaacatggtggatgaaggctacgcagccacacag
atcctgagtcagctccatgagtctatcatagagcaggacctgagtgacaaggagaagtca
gccatcacagagaagatggcggttgtgggtaagtgcctggcagatggtgcagatgagtac
ctgcagatgttgagcctctgttcagtcatcatgcagcaggcctcccagaacagcagctaa
DBGET
integrated database retrieval system