Seriola dumerili (greater amberjack): 111232007
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Entry
111232007 CDS
T05606
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111232007 (sned1)
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
111232007 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
EGF_Teneurin
cEGF
SdrD_B
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
111232007
NCBI-ProteinID:
XP_022615058
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MVLVLRALLPCLCTLLSLDLLPGVEPAVPLEDFYPFGQDKGDTQTIAQDDGGSGLVEISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQEPYILSRASGDVRTYFSEFPNFNATWVLVSTWHQVTFFGGNSRTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGNRYFNIPGSRTADVVN
VEGTTNVGYPGRWVFRIDNAHVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRRCQIDVDECASYPCQNGGTCKDQINSFICQCPPGYTGILCETDLDECKDRPC
LNDALCVQGAGSFTCVCEPGYTGVLCETDINECESQPCLNGGECIDQVANFTCICPSTFT
GMLCETALCEEEDCKKHQICEYTSSGLYNCTCAPGFYGDKCEEECPCQNGGVCVDINGTC
ECPSGYTGLYCQFEVTQTPCSNSRPCPDGGPCLEYGGTYLCTCQTSGVEVDHKDIYPYVQ
PRSVCDSFPCLNGGYCYERDGGYTCECKYGYWGKHCEKVRLNSCASGPCRNGGSCKEEAG
SYRCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCECTEAFSGRHCEISRSS
VQTSSELSCGPPPQVKHAEVQFSSTTPGSMAVYICHSGFTPVPRATQSICGIQGDWSQPP
ICEEINECLSQPCLNGGTCRNQVGSYQCECSDGFSGNRCQTDINECLSEPCKHGGTCEDQ
PGSYLCHCPQGFKGRSCEIEQDACDSNPCLNGGVCRGYRRHYLCVCKDGFFGDQCQMLED
PCVLQLCGNRGVCKTDRRGNYNCVCKTGYTGKDCEKDLLPPSGLHVLRVEENEVELRWDE
PEPSHSLISGFAVTYAPLGRSDPKTDYLDRQQSTHVMRGLVPGLLYNISTYSIKRSSNRK
DSSQPATALIRTRPRRVEQLQVVNVSSSQVWLSWLVQAARHAAVSRVHVSLLPSDGSEAR
TAVLNTSTTEHTFSSLRPGQMYTVDVLTQSGIRPDEFPSTSHSAGPLQFWTRPLPPQNLS
LSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPNGKLGSYTLRELTPGQHYYV
ALTSVKNTGQEQIHSVPQHLAFTTLPMEARSPRRERPTATGQGGQVGRTPPPSQPQDLGG
TAETENSEELPRYTELIDRRGKITAKFTHLPRKAIRHRNKPDPPIRLEKMEETTNKISLA
LEIQEEGLRTKPELPQDCRSLPCQNGGTCVNGGDSFICDCTAGFKGRQCELSCQRVPHPC
TRIYSETKSVPVWEGGVCHYLYKRTYKVQQDVCYREICEPVLPKKSQVRRTNRQQ
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcctctgcaccctgctctccctggacctg
ctgcctggggtggaacctgccgtgcccctcgaggacttctatccctttggccaggacaag
ggggacacccagaccatcgctcaggacgacggaggctccgggctcgtggagatctctgtt
gctttccccttctttggagacaggcacaccggactctatgtgaacaacaatggcctcgta
tctttcctgagggaggtgtctcaattcacacccgttgcttttccgatcgccggggacagg
agggtcgtagcgcctttctgggccgatgtggacaaccgccgggcagggagagtcttctac
agggagagccaggagccttacatcctgagcagggcctcgggtgacgtcaggacgtacttt
tcagagttccccaacttcaacgcaacgtgggtcctcgtctcgacatggcaccaagttact
ttcttcggaggcaactcgcgcacaccggtaaatactttccaagtggtgctcattacagac
ggagagctttccttcactatattccagtacaataacatcacttggaccacaggcatgcat
gccagcagcgggggaaacctggctgggctaggagggatcgcggcgcaggcaggtttcaac
gccggtgacggcaatcgctatttcaacatccccggctctcgcacggccgatgtggtgaac
gttgagggaaccaccaacgtgggctacccgggcagatgggtcttccgtattgacaacgca
cacgtagaagtgggtggctgcaacaactccgcgtcggtgtgcccacacctgcgaccatgc
ctgaacggaggccagtgcattgacgactgtattacaggcaacccctccttcacttgctcc
tgcttggctggcttcaccggtcgccgatgccagatcgatgtcgatgaatgtgcttcgtat
ccttgccagaacggagggacttgcaaagaccagattaacagtttcatctgtcagtgtcct
cctggatacactgggattctgtgtgaaacagaccttgacgagtgcaaagacagaccgtgc
ctcaacgacgcgctgtgtgtacaaggcgctggcagcttcacctgcgtgtgtgaaccaggt
tacactggtgtcctgtgtgagacagacataaacgaatgtgagtcgcagccctgtctgaat
ggaggagagtgcatcgatcaggtggccaacttcacctgtatttgtccgtctaccttcact
ggaatgctctgtgagacagccctgtgtgaggaggaggattgcaagaagcaccagatttgt
gaatacaccagctccggactctacaactgtacatgtgctccaggcttctacggtgacaag
tgtgaagaggaatgtccttgccagaatgggggtgtctgtgtggacatcaatgggacttgt
gaatgcccttcaggctacacaggactctactgtcagtttgaagtaacccagacgccgtgc
agtaacagcaggccgtgtcctgatggaggtccttgtctggagtacggcgggacctacctg
tgtacatgtcagactagtggagtagaagtagatcataaggacatctacccctatgtacag
ccccgatcggtctgtgactcctttccatgtctgaatgggggctactgctacgagcgggac
ggaggctacacctgcgaatgcaaatacggatactgggggaagcactgtgagaaagtcaga
ctcaatagctgcgcctctggtccctgccgcaacggaggctcctgtaaagaagaggcaggg
agctacagatgcgtgtgtccttacagattcactggaaaacactgtgaagtggggaagcca
gacccctgtgcctcgagcccctgtctaaatggggggacatgtttccactacatagggaag
tataaatgtgaatgcactgaggccttcagcggcagacactgtgaaataagcaggagctca
gtgcaaacttcatcagagctgagctgtgggccgcccccgcaagtgaagcacgccgaggtc
cagttctcctcaacaacaccaggctccatggctgtgtatatatgccactccggcttcacg
ccagtgcccagagccacccagagcatctgtggtattcagggagactggagccagccaccc
atttgtgaggagatcaacgagtgcctgtcacagccgtgtctcaacggtggtacgtgtcga
aaccaggtcggatcctaccagtgtgagtgtagcgatggcttcagtggaaatcgctgtcaa
acagacataaatgaatgcctgtcggagccctgtaagcacggcgggacatgtgaggaccag
cctggctcctacttgtgccactgtccacaaggcttcaaaggccgcagctgtgaaatagag
caggacgcgtgcgactccaacccctgtctaaatggaggtgtgtgtcggggttacaggagg
cattacttgtgcgtgtgcaaagacggcttttttggggaccagtgccagatgttggaagac
ccatgtgtactgcagctttgtggaaaccgtggcgtctgcaagactgacaggagagggaac
tacaactgtgtttgcaaaacaggatacacgggcaaagactgtgagaaagacctgttgcct
ccctctggtctccacgtgctgcgtgtggaggagaacgaggtggagctgcgctgggatgag
ccggagccctcgcacagcctgatcagcgggttcgccgtcacctacgctcccctgggccgc
agcgaccccaaaacggattacctggacaggcagcagtccacccacgttatgcgaggcctg
gtgcccggcctgctctacaacatctccacctactccatcaaacgcagcagcaacaggaaa
gactccagccagcctgccaccgcactaatacgcaccagacctcggcgggtggagcagctg
caggtggtcaatgtgtcttcatctcaggtctggctcagttggctggtccaggcagctcgc
cacgccgcagtcagcagggtgcacgtgtctttgttgccctcagatgggagcgaggctcgc
actgcggtgctcaacaccagcaccactgagcacaccttcagctcattgcgtcctggtcag
atgtacacagtggatgtgctgactcagagtggaatcagaccggatgagtttccctccacc
agccactcagctggacccctgcagttctggacaaggcccctccccccgcagaacctctcc
ctgtcacatgtgaccactaactcagcgctgatcacctggagccgccacccgagaaacgtc
ccagatggctttgtggtcaacgtgacccgagggttgaataccaggagtcgcttcctgccc
aatgggaagttaggatcatataccctccgtgaactgacaccaggacagcactactacgta
gctctcacatccgtcaaaaacacagggcaggagcagatccacagcgttcctcagcacttg
gccttcactaccttgccgatggaggccagatcaccaagaagagagaggccgacagcaact
ggacaggggggtcaggtgggacgcacacctcccccatcccagcctcaggacctgggggga
acagcagaaacagagaactcagaggaactgcccagatacacagagctcattgacaggagg
ggaaagataacagcgaagttcactcacttacctcgaaaagccattcgacatcggaataaa
cctgacccgccgattagattagagaagatggaagaaacaacaaacaaaatcagcctcgca
ctggagattcaagaggaaggtttaagaacgaagcctgagttgccccaggactgccgcagc
ctgccctgccagaacgggggtacatgtgtgaacggaggtgactccttcatctgcgactgc
acagcggggttcaagggcagacagtgtgaactgtcgtgccagcgagtgccacacccgtgt
acccgaatctactctgaaacgaagagtgtgcctgtgtgggagggcggagtgtgccactac
ctgtacaaaagaacatataaagtacagcaggatgtctgttatcgagagatttgtgaaccg
gtgcttcccaagaagagtcaggtcagaagaacaaacagacaacagtga
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