Seriola dumerili (greater amberjack): 111232127
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Entry
111232127 CDS
T05606
Name
(RefSeq) retinoic acid receptor RXR-gamma-B
KO
K08526
retinoid X receptor gamma
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03320
PPAR signaling pathway
sdu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
111232127
03320 PPAR signaling pathway
111232127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111232127
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sdu03310
]
111232127
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
111232127
Nuclear receptors [BR:
sdu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
111232127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
111232127
NCBI-ProteinID:
XP_022615212
UniProt:
A0A3B4TZ08
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MDSNDPYLHLNSTGPMSTAHTHPPPMGGMVGHPSVISTSRPLPSPMSTLGSPMNGLASPY
PVITSSLGSPSVSLPSTPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGLQNLGNINYQCTS
PGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKECLIDKRQRNR
CQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEDMPVDKILDAELAVEPKT
ETYSDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELL
IASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGC
LRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAKLLLRLPALRSIG
LKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaatgatccgtatttacacctcaactccacagggccaatgagcacggcccac
acccacccgcctcccatgggtggcatggtgggccacccgtcagtcatcagcacttccagg
cccctgccgtcccccatgtccaccttgggctcgccgatgaatggcctggcctcaccctac
cccgtcattacatcatcactgggctcaccttctgtgtcgctgccgtccacgcccaacatg
aactttggaccactcagcagtccccagatgaactctatgaacagtgtcagcagctcggag
gacatcaagcctccgccaggcctacagaacctgggaaacatcaactaccagtgtacgagc
cccgggggaatgtcaaagcacatctgcgccatttgcggggaccgctcctcaggaaagcac
tacggtgtgtacagctgtgagggatgcaaaggcttcttcaagaggaccgtccgaaaagat
ctcacgtacacatgtcgagacaacaaggagtgcctgattgacaagcgccagcgaaaccgc
tgccagtactgtcgctaccagaagtgcctggccatgggcatgaagagagaagcggtgcag
gaagagaggcagcgtgggaaggagcgaggggagaatgaggtggaatctaccagcagtttc
aacgaggacatgcctgtggacaagatcctggatgctgagctcgctgtggaacccaaaaca
gagacgtacagtgacggcagccccggaaactctaccaacgacccagtcaccaatatctgc
caagcagcagacaaacagctcttcacactggtggagtgggccaaaaggatcccgcacttc
tctgaactcccgctcgatgatcaggtcatcctactacgagcaggctggaacgagttgctt
attgcctcattctcgcatcgctcagtcacggtaaaagacggcatcctgttggcgacaggc
ctccacgtccacagaagcagcgcccatagtgctggagtgggctccatctttgatagagtc
ctgacagagctggtatctaaaatgaaagatatgcagatggataagacagagcttggctgc
ctgcgtgccatcgtcctgttcaacccagacgcaaaaggtctttcaaacccaccagaggtt
gaggggctaagggaaaaagtctacgcttcattggagtcgtatacaaaacagaaatacccg
gaccagcctggcaggtttgccaaactgctgctccgcctgcctgccctgcgctccatcggc
ctcaagtgcctggagcatctgttcttcttcaagctgattggggacacacctattgacacc
ttcctgatggagatgctggaggctccgcatcagatcacatga
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