Seriola dumerili (greater amberjack): 111232167
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Entry
111232167 CDS
T05606
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111232167
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
111232167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRR_9
LRRNT
V-set
LRR_6
Cupin_1
Motif
Other DBs
NCBI-GeneID:
111232167
NCBI-ProteinID:
XP_022615275
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MGVSLSQDVGWLLPFLFLLLMITVSPTQSQGCPQRCECIAKLKTVSCYGKRLSALPDGIP
LDTKILDLSGNKLRWVEHGDLLPYLRLEKLDLSDNMISVLEPNAFSSLQNLQSLSLRGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISALEDQNFRKLGNLRGLEIDHWP
FLEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSFNPISVLESWALRDL
VRLKELHLVNTNLAVVQPYAMGGLRQIHLLNLSTNSLVTLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDGASPVCMMPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQISAREGQVVSFICRAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVM
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgagcctgagccaggatgtaggctggctcctgcccttcctgttcttgctactg
atgatcacggtgtcacccacccagagccaaggatgtccccaacgttgtgagtgcattgca
aagctcaagactgtgtcctgttacggtaaacgcctgtctgccctgccagacggcatccca
ctggacaccaagatcctggatctaagtgggaataaacttcgctgggtagagcacggtgac
ctgcttccatatctacgtcttgaaaagctggacctgagtgacaacatgattagtgtcctg
gaaccgaatgctttttctagtcttcagaacctgcagtcgctttcattgaggggtaaccag
ttaaaactggtccccatgggggctttctcacgtctctccaacctaacttcactggatctc
agtgggaataaaattgtgattcttttggactttactttccaagacctgaaaagtctaaaa
aaccttgaggttggagacaatgatctggtttatatctccaacaaggcctttctgggtcta
gtggggctgagggagctgaccattgagaggtgcaacctgacttctgtgtccagccagtct
ttgtcttacctgcataacctggtgactctgcggctccgctacctcagtatctccgcctta
gaggaccagaacttccggaagctgggaaacctgagggggctcgagatcgatcactggccc
tttttggagtacatttcccctcacagcctgcagggtcttaacttgtcttggctgtctatc
acgcacaccaacatcacctctgtgccgacctctgccctgcgcagtctggctcacctcacc
agcctcaacctctccttcaaccccatctctgtgttggagtcctgggcgctgcgggacctt
gttaggctgaaggagctgcatctggtcaacactaacctggcagtagtgcagccatacgcc
atgggtggtctgaggcaaatccaccttctcaacctctccactaacagcctggtgaccctg
gaagagggagcctttcaatccgtcaacactctggagacgctgcgtttggatggaaaccct
ctggcctgcgactgccgcctgctctggatccttcagcgcaggaagaccctcaattttgac
ggtgcttctccagtgtgtatgatgcctgttgaggtgcaaggacgggctcttaacgctttc
tctgactcagctctctttgaccactttacttgccagaagcccaaaatccgcaacaggaaa
ctgcagcagatatctgcccgtgagggacaggttgtgtcattcatttgcagagcagagggt
gagccaacaccagtgatattctggatctcaccccagcgccgtcgcatcaccacaaagagc
agcggacgcctcactgtattaccagaaggcacactagaaatacggtacgcccaggtaatg
gatagtggaacttacatatgcatagccagcaacgctggtggaaatgacacctattttgcc
acactcacagttagtgggctgccactagatgcagcccttatggccaaccgcacttactat
gctggggaccttaatgacacaaatctaaatgataccagagtcttcttgaagttcactctg
gacctcaagaccatcctcatatccacagctatgggctgtatcatgttcctgggtgtagtc
ctgttctgtttcattctgctgtttgtgtggagtcgagggagagggcagcacaagaacaat
ttctcagtggaatattccttcagaaaagtggatggacctgctgccagtggaggacagggt
ggggcacgcaagttcaacatgaaaatgatttga
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