Seriola dumerili (greater amberjack): 111232238
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Entry
111232238 CDS
T05606
Symbol
ncam1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sdu04514
Cell adhesion molecule (CAM) interaction
sdu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111232238 (ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111232238 (ncam1)
04517 IgSF CAM signaling
111232238 (ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111232238 (ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111232238 (ncam1)
04090 CD molecules [BR:
sdu04090
]
111232238 (ncam1)
00536 Glycosaminoglycan binding proteins [BR:
sdu00536
]
111232238 (ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sdu00537
]
111232238 (ncam1)
04091 Lectins [BR:
sdu04091
]
111232238 (ncam1)
Membrane trafficking [BR:
sdu04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
111232238 (ncam1)
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
NCAM1/2
111232238 (ncam1)
CD molecules [BR:
sdu04090
]
Proteins
111232238 (ncam1)
Glycosaminoglycan binding proteins [BR:
sdu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
111232238 (ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sdu00537
]
Others
111232238 (ncam1)
Lectins [BR:
sdu04091
]
I-type lectins (Siglecs)
111232238 (ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
V-set_CD47
Pur_ac_phosph_N
Ig_5
Ig_PDGFR_d4
C1-set
C2-set_2
Adeno_E3_CR1
C2-set_3
Fn3_VIN3
C2-set
Motif
Other DBs
NCBI-GeneID:
111232238
NCBI-ProteinID:
XP_022615380
UniProt:
A0A3B4UGU2
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MVQSRDIFLALLLVGCTVSLEVMITPSHGEISLGESKFFMCEVVGVAKHIDWFGPSGDRI
EPNRPDITVTRNDESSSTLTLYKAGTENAGTYKCVATNGDQQAESTVKVKIFQKITFTNA
PSPQEFTEGDNANIICDVISSPPPTVLWKYKGAKIQMEKDVRFKVLSNNHLQIRGIKKTD
EGSYTCEGRLMARGEIDLRVIKVVVNVLPTIRVWQSEVNATADVGQSAMLTCAVDGYPEP
MVTWTRNEVVLEAGEKYSFNEDGSEMTIMDVTKLDEGEYTCIAKNKAGESEQELSLRVFV
KPKITYIVNQSTSEMEEQVTLTCEASGDPTPTINWSYGERVFTEGEQAHLNRIYQASWTR
PEQHKSLDGNVVVRSDARVSSLTLKYVKYTDAGQYLCTARSAIGEDDQLAYLEVRYAPKI
QGAVAVYTWEGNPVNISCEVMAHPNDVSIVWLRDGLQLPNSNTTNIKIFRTPSASYLQIT
PESENDFGSYNCTASNEMGTESKEFLLIQAEVPSAPSISEVRPFSTTAQIQFEEPESTGG
VPVQKYKVEWRTQHRGSWVHRVFEVQDGSISEVTITGLKPETSYEVKLSAINGKGEGEST
PAEFFKTEPVRNPNPPKLEGILQPKGNSLKISWIKQDDGGSPILHYLIRYKPIQASEWKP
EIRLPSGSEYVVLSGLEWDTEYNVYVVAENQKGKSQPATMSFRTSTEPDAIPDLGDEAAL
SMGIMIWAGILVVVFVLLLLAVDVTCYFVNKCGLIMCLCGKSGTGTKGHNLEEGKAAFIK
DESKEPIVEVRTEDECTANHNAAGPTEPNETTPLTEPELAAYTAALALETLSSVATNSDT
ATATIDPAQDSPSSETTTLTCSLSTPANDPSPTPILAPAPTPESNATPPTPLLSTSAVEA
KMAPLVEQRGNNTPEEQEKKITPPCTPERTKAQKSGTPIPPKRRHSPKLAALNAKGSPSV
SPLAASSSSSSPTLDTKKPAPSPPVTKLPMQPHAVALDTETPAQTASILATTAPPKPDTD
STTTAPDSSGRSLTAFDTNKPTDQTVDNNIPTAKDAVISSPSVIHSALKVLDAEEPAPLV
ADVFSALPVTAISSAPAPPSQGALVSNDLLTAVSDTYDLLTPDVAPRSANLELELTNGTE
RPSLPSTDLISLDSPPSAPSLPNGDGADLPPSGPVLEASETLAKTAPPVNDEKIFSDEKV
KLEEAELSNALTEIAAEHNSVIQTKSTESKA
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggtccagtcaagggatatttttttagccttgcttcttgtgggctgtacagtttcactg
gaagtgatgatcacaccaagtcatggtgagattagtctgggagagtccaaattcttcatg
tgtgaagttgtaggcgttgccaagcacatagactggtttgggccgagtggggacaggata
gaaccgaacagaccagacataacagtaacccgtaatgatgagtcatcttccacgctcacg
ctgtataaagctggcactgaaaatgcagggacatacaagtgtgtcgctaccaatggagac
cagcaagcagagtcaactgtcaaagtgaaaatctttcaaaaaatcaccttcactaatgca
ccctcaccccaagagtttactgagggagacaatgctaacattatctgtgatgtcatcagt
tcacctcctcccactgtactatggaaatataaaggagccaaaatacagatggaaaaagat
gttcggtttaaggtactgagcaacaatcaccttcaaatccgtggcataaagaagacagat
gagggctcatatacctgcgagggtcgcctcatggcccgcggcgagattgatctgcgggtc
atcaaggtcgttgtgaacgtgctcccgaccatcagggtatggcagtcggaggtgaatgcc
acagcagatgtcgggcagtctgccatgttgacttgtgctgttgatggctatcctgaaccc
atggtgacttggacaaggaatgaagtggttctcgaggcaggagagaagtatagctttaat
gaagacggctcagaaatgacaataatggatgttaccaagctggatgaaggagagtacacc
tgtattgccaagaacaaggctggggaaagtgagcaggagctcagtctaagagtgtttgtc
aaacctaagatcacatacattgtaaaccagagcacgtcagagatggaggagcaggtaact
ctaacttgtgaggcttcaggtgatccaactcccaccatcaactggagctatggtgaacgc
gtcttcactgaaggagagcaggcacatctaaacaggatctatcaggcatcatggactcgg
cccgagcagcacaagagtctggatggaaatgtggtggtgaggagtgatgctcgtgtgtcc
tctctcactctgaagtatgtcaagtatacagacgctggccagtatctctgcacagcacgc
agtgccattggagaggatgatcagctggcgtacctggaggttcgctatgcccctaagata
caaggtgcagtggcagtgtatacctgggagggaaatccggtgaatatcagctgtgaggtg
atggctcatcccaatgatgtatctattgtttggctgagagatggactgcagctccccaac
tcaaacaccaccaacatcaagatcttcagaactccatcagccagctacctgcagataacc
cccgagtctgaaaatgactttgggagctataactgcaccgcctctaatgagatgggcaca
gagtccaaggagttcctgctcattcaggccgaggtgccatcagcaccatccatcagtgag
gtgaggcccttctccaccacagcacagatccagtttgaggagcctgagtccactggaggt
gttcctgtgcaaaaatacaaagtggagtggaggacgcagcacaggggcagctgggtgcac
agggtatttgaggtccaagatggctccatcagtgaggtgactatcacaggcctgaagcca
gagaccagctacgaagtgaagttgtcagccatcaacggcaagggtgaaggtgaaagcact
ccagctgagttcttcaagacagagcctgttcggaatcccaatcctccgaagcttgaagga
atacttcaacccaaaggcaactccctcaaaatcagctggatcaagcaagacgacggtggc
tcacccatcttacattatctcatccgctataaaccaatacaagcgtcagagtggaaacca
gaaatccgactgcccagcggcagcgagtatgtggttctcagtgggttggagtgggataca
gagtacaatgtctatgtggtggcagagaatcagaagggcaagtcgcagccagcaaccatg
tccttcaggacgtccacagagccagatgccatcccagatttgggtgatgaggcagcgctc
tccatgggcatcatgatctgggcagggatccttgttgtggtatttgtactcctgctgctg
gctgtggatgtcacctgttactttgtcaacaaatgtggcctcatcatgtgcctctgtggc
aaatcaggcacagggaccaaaggacacaacctggaggagggcaaggcagctttcataaaa
gatgagtccaaagagccgatcgtggaagtcagaacagaggacgagtgcacagccaatcat
aacgcagcaggacctacagaacccaatgaaactacacctctcacagagccagagctggcg
gcttacactgctgctctggcactggaaaccctctcctccgtagccaccaactctgacaca
gccactgcaacaattgaccccgctcaggacagcccctctagcgagaccactaccctcact
tgtagcctgtctaccccggccaacgacccctcacccacccccatcctggccccagcccct
actccagagtcgaacgcgaccccaccgactcccctcctctctacgtctgccgtcgaggct
aaaatggcccccttagtagaacaaagaggaaacaacaccccagaagaacaagagaaaaaa
atcactcctccttgtacacctgaacggactaaagctcaaaaatctgggacaccaatacca
cctaagcgtcgacactctcccaaacttgccgctctgaatgctaaaggtagcccctctgta
tctccacttgctgcgtcttcctcatcgtcctctcctactcttgacaccaagaaacctgct
cccagcccgccggtcaccaagcttcccatgcagccacatgctgtagccttagacaccgaa
acaccagcacaaactgcctccattctagcaaccactgcccctccaaaaccagatactgat
tcaactactactgccccagactccagtggtcgtagccttactgcctttgacactaacaaa
cctactgaccaaacagttgataataacatacccactgccaaagatgctgttattagctct
ccttcagtgatccacagtgctcttaaagtcctggatgctgaagaacctgctcctctagtt
gcagacgtcttctctgctcttcctgttactgccatttcttctgctcctgccccccccagt
caaggggcactggtctcgaatgatctcctcacagcggtgtcggacacgtatgacttacta
acccccgacgtggcacccagaagtgctaatttagagttagagctgacaaacgggaccgag
agaccctccctgccctcgacagaccttattagtttagacagcccgccctctgccccctct
ctgcccaacggagacggagcagacctccccccctcaggcccagttctggaggcatcagag
actctggccaagaccgctcctcctgtcaacgatgagaagattttttctgatgagaaagtc
aaactggaggaggccgaattatcaaacgccctgacggagatcgctgcagaacacaacagt
gtcatacagacaaaaagcaccgagagcaaagcatga
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integrated database retrieval system
