Seriola dumerili (greater amberjack): 111232241
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Entry
111232241 CDS
T05606
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03030
DNA replication
sdu03420
Nucleotide excision repair
sdu03430
Mismatch repair
sdu03440
Homologous recombination
sdu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111232241 (rpa1)
03420 Nucleotide excision repair
111232241 (rpa1)
03430 Mismatch repair
111232241 (rpa1)
03440 Homologous recombination
111232241 (rpa1)
03460 Fanconi anemia pathway
111232241 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111232241 (rpa1)
03032 DNA replication proteins [BR:
sdu03032
]
111232241 (rpa1)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111232241 (rpa1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111232241 (rpa1)
DNA replication proteins [BR:
sdu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111232241 (rpa1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111232241 (rpa1)
MMR (mismatch excision repair)
111232241 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
111232241 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Pox_vIL-18BP
RADX
A_deaminase
Motif
Other DBs
NCBI-GeneID:
111232241
NCBI-ProteinID:
XP_022615399
UniProt:
A0A3B4UCI4
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MTKLSEGAIESLSNGTGGNDAVLQLVNIRKIDGGNGPARFRVMMSDGRHTLSSFMLSTQL
NCLAEENRLAPNCICVLKRHVTNILKDGRRVVIILEIDVIKPAEEVAGKIGDPTAYTEGH
TKGPQSAPNPESRPPLHPQNRNEVNRGFSRDFGKKPPSAIPSTPGGSAKVVPIASLNPYQ
SKWTIRARVTNKSTIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVDKFYSLIEVGKV
YYISKCSLKIANKQYTSVKNDYEMTLNGESSVIPCEDSSDVPMVQCDFISIGDLENRDKD
AVVDVIGVCKSVEEVTRLTTKTNREVSKRTLNLMDMSGKVVTVTLWGEEAEKFDGSGQPI
VAIKGAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKEGHAMDGQSLTELKGGSG
GGNTNWKALSDVKTEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVVDQQNG
MFRCEKCDKEFPNFKYRLILSANIADHGDNQWVTCFQESAEAILGQNAAYLGQLKDSNET
AFDEIFQQANFNTFVFRNRVKLETYNDESRIKATVMDVKSVDHKDYSKRLIMNIRKLAAQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctctcagagggtgcgatagagtctctttcaaatggcaccggtggcaacgac
gcagtgcttcagttggtgaacattcgcaagattgatgggggaaacggcccggctcgcttt
cgggtgatgatgagtgatggacgccacactctgtcctccttcatgctttccactcagctg
aactgcctggcagaggagaacagactggcccccaactgcatctgtgttctgaagaggcat
gtgaccaacatactgaaggatggacgtcgggtggtaatcattttggaaattgatgtcatc
aagcctgctgaagaagttgctgggaaaataggcgaccctactgcttacactgagggtcac
actaaaggcccgcagtcagctccaaaccccgaaagccgccctccattgcacccgcagaat
agaaatgaagtgaacagaggtttcagtagagactttggaaagaagcccccatctgctatc
cccagtactccagggggaagcgccaaagttgtgcccattgccagcctcaacccctaccag
tccaagtggaccatccgtgctcgtgtaaccaacaagagcaccatccgtacatggagcaac
tctcgtggtgatggcaaactcttctccatggagattgtggatgagagtggagagatacga
gtgactggcttcaaccaagaggtggacaagttctacagcctaattgaggttggcaaggtc
tactacatctccaaatgctccctgaagatcgccaacaaacagtacacatcagtgaagaat
gactatgagatgacgctcaatggagagtcctcagtcatcccctgtgaagacagcagtgat
gttcccatggtgcagtgcgacttcatctctattggtgacctggagaacagagacaaagat
gctgtcgttgatgtgattggagtttgcaagagcgttgaagaggtgacccgcctcacaaca
aagaccaacagagaagtgtcaaagaggacactcaacctgatggacatgtctgggaaggtg
gtgactgtcacgctgtggggagaggaagcagaaaagtttgatggctctggacagcccatt
gtagccattaagggggcgaagctttcagactttggaggccggtcgctctctgcatccttc
agcagcaccctgatgatcaacccagacatccctgaggcatataagctcagaggctggtat
gacaaggagggccatgccatggatggacagtctctgacagagttgaaaggtggcagtggg
ggaggaaacaccaactggaaggctctatctgacgttaagaccgagcacctgggacatgga
gacaaggctgactactacacctgcattgctaccattgtgtacctgcgcaaggaaaactgc
ctttaccaggcctgcccgagccaagactgcaacaagaaagtggtagaccaacagaacggc
atgtttcgctgtgaaaagtgtgacaaagagttcccgaacttcaagtaccgcctcatcctg
tctgccaacattgcagatcacggagacaaccagtgggtgacttgcttccaggagagtgca
gaggccatcttgggccagaatgcagcttacctggggcagctcaaggactcgaatgaaact
gccttcgatgagatcttccaacaagccaatttcaacacgtttgtcttccggaacagagtg
aagctagaaacgtataatgatgaatccaggatcaaggcaacagtgatggatgtgaagtct
gttgaccacaaggattacagcaagaggttgatcatgaacataaggaaactggctgcccag
tag
DBGET
integrated database retrieval system
