Seriola dumerili (greater amberjack): 111232355
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Entry
111232355 CDS
T05606
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111232355 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111232355 (cstf2)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111232355 (cstf2)
U7-dependent histone pre-mRNA processing factors
111232355 (cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
111232355
NCBI-ProteinID:
XP_022615543
UniProt:
A0A3B4T597
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MANVAAAAAAAAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSF
RLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLG
TGAPIIESPYGDSVQPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQN
PQLAYALLQAQVVMRIVDPEIALKMLHRQTTVQPLIPSGQGGGAPPVNPPPAQPSVPVSQ
PQPVPGMHVNGAPQMMQPPNMGVVPGPMPGPGPGPGPVGPPGNLQHSPTGSSGQAAIERP
QGPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIDPNRGYMAAPPPHQAPPVHMGQMASGPP
PDMRGPPMDMRGPPMGEPRNMMGDPRGPPMMEPRGPPMETRGRDPRAMDARGPVTAQRVP
MAGAMQGPVPHSMGPNAPPPARPGPGLSGAPPSGGGFSPGQSQVSTQDQEKAALIMQVLQ
LTPEQIAMLPPEQRQSILILKEQIQKTAGGAP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtagctgctgctgctgctgctgcggctgctgcagccgctgctgccgccgca
aatagagatccagccgttgaccgttccttacgatcagtgtttgtgggaaacattccgtat
gaagccacagaagaacagctgaaagacatcttttccgaagtcggacttgttgtcagcttc
aggttagtatatgacagagagacaggaaagccaaagggatatggcttttgtgaatatcaa
gaccaggagacagctctcagtgccatgcggaacctgaacgggagagagttcagcggtcgg
gctctccgtgttgacaacgcagccagtgagaaaaacaaggaagagcttaaaagtttggga
acaggagcccccattattgagtctccttatggagatagtgtccaaccagaggaggcccca
gagtccatcagcagagctgtggccagtctgccaccagagcagatgtttgaacttatgaaa
cagatgaagctgtgtgtgcagaacagtccccaggaggcaaggaacatgctgctgcagaac
cctcagctggcttatgctctgttgcaggcccaagtggtcatgcggattgttgaccccgag
atcgccttgaaaatgctccaccgtcaaactacagtccagcccctgattcccagcggacag
ggtggaggagcaccgccagtcaatccacctcctgcacagcccagtgtgccagtgtctcag
ccgcagcctgtgccagggatgcatgtcaacggagcccctcaaatgatgcagccccccaac
atgggtgttgtccctggaccaatgcctggaccgggcccgggaccaggaccagttggacct
ccaggaaaccttcagcattctcccacaggatcgtctgggcaagctgcaatcgagcgccct
caaggaccaggtggaatcccccccagaggcctgctgggagatggtcctaatgatcccaga
ggaggaactctgctgtctgtcactggagaggtcatagaccccaaccggggctacatggca
gctccaccgccccaccaagccccacctgtacacatgggtcaaatggcaagtggaccccct
ccagatatgagaggacctccaatggacatgagaggcccacccatgggtgaaccacgaaac
atgatgggtgaccccagagggcccccgatgatggagccacgggggcctccgatggaaacc
agaggtcgtgacccgagggcgatggacgctcgtgggccagtgacggcacagagggttccc
atggcaggagcgatgcaagggccagttcctcatagcatgggtccaaacgctcctccgcct
gcaagaccgggtcctggtctttctggtgctccaccatcaggaggcggcttcagtccaggg
cagagccaggtctccacacaggaccaggagaaggctgccctgatcatgcaagtcctgcag
ctgaccccagaacagatcgccatgttgcccccggagcagcggcagagcatcctcatcctc
aaagagcagattcagaagactgcaggaggggcgccatga
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