Seriola dumerili (greater amberjack): 111232444
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Entry
111232444 CDS
T05606
Symbol
limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111232444 (limch1)
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
111232444 (limch1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
111232444
NCBI-ProteinID:
XP_022615690
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MRKEAEEAESPKRSIRDSGYIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPD
VLVARGSSDGRGSDSESDGPPHRKMPDIRKDDMLARRTSVSEPRTAMPFNQYLPNKSNQS
GYLPTPLRKKKGDKEEGGRKSWSTATSPIGGDRPFSTPARSCSEELFHHSTPLAGNATAA
SAVASAPANAAGRQPPPAEREEAVAGAPFAADAEQEEKRARRTLTSPKRIATQSPSHFLP
VPAAMATTSKETAGTGRRKGRALSESDDPQGGTSWLDSGLPATFSHTDSVSDDSQSVSMI
DMRGEEDTILQPHSQVRHELMHNQYNRMKEEEDHWQDDLARWKNRRRSISQDLIKKEEER
KMMERLMSGDTCPSHRRRSIKTYREIVEDKERREEELRDAYRRARSPEEASVILQRYAQR
FSISEAVLERLQLPKLLDRSISADPSFPCSPFPLSLAASPTTPDPFDVDPNGPLRYLRQQ
SAPAPKFTSTLEARIEEFPKDLSSHQRPQIRSRSSEPPSTRALSPKPVPLLTPKPYFETR
STAAEPRPSKADGLLRINGNIGSDDVPTTPESQGRESPPHFQASPSKTSNSTVDARSSAA
SPAHSPHASPAGGSPASTKAKEEVRGASEAAAEDVREEKKVAEHSTPPSRPTSLPTELQK
PEESFGKAGVQTAAAPEEKKSAAAQPAPAAEAKREQEKAEPSDQSISSLLQSGVGTQQSQ
PVTLQTTVPTPQELSRRRENVPSLPAPGSSGYHPPRETTAEFANSVRSPLATSNPKLRWE
FFAPPEEAEKDRRGNVSVPVLPQARRGDRWSWDPDEERKRQERWQQEQERMLQEKYRREQ
EKLKEEWEKAQREVAEEERKYHEEERKILEETVAPLTPRSSALPSPSRGELSSTAAPQDT
IVRSLADWERKQELLERQSRGSTESVEAKRRENDRTSDISTADDSMKTARSSLSQSSSQT
GTLTAHSLQNGQKLPAVSAKSSTPVKKQQDLTAESNKPSRPAGDRRSGPIDNNMSRSSSK
PPAACSPTPDTLPPTPNRSVSGKKLCSSCGQPLGKGAAMIIETLSLYFHIHCFKCGVCKG
QLGDTTTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaggaggcggaggaggcagagagccctaaacgcagcatccgggacagtggctac
atcgactgctgggactcagagcgcagcgactctctctcccccccacgccacggccgcgag
gactcgttcgacagcctggactccttcggctcacgctcacgacaaaccccgtcgccagac
gtcctggtcgcccgcggcagcagcgatggccgtggcagcgactcagagtccgacggtccc
ccccacaggaagatgccagacatccgtaaggatgacatgttggcgcggcggacgtccgtc
agcgagccgcgaactgccatgccctttaaccagtacctccccaacaagagcaaccagagt
ggatatctacccacgccgctccgcaaaaagaaaggcgacaaagaggagggaggacgcaag
agctggagtactgccacgtcacctataggtggagacagacctttcagtactccagctcgc
tcgtgctcagaggaactcttccaccattcgacgcctctagcaggaaacgccacggcagcc
tcagcggttgcatcggctcccgccaacgcggccgggagacaaccacctccagcagagcgg
gaggaggcggtcgctggtgcgccgttcgcggcagatgcggagcaggaggagaagcgggcc
cgtcgaacgctgacctctcctaaacgcatcgccacccagagtccctcccattttcttccc
gtgcctgctgccatggcaaccacttcaaaagaaacagccggtacaggccggcgaaagggc
agggcactgagcgaaagtgacgacccgcagggagggacctcctggttggacagcggtctt
ccagcaacattcagccacacagatagtgtgtcagatgactcacagagtgtgagtatgatc
gacatgcgtggagaagaggataccatcttgcagccccacagtcaggtgcgtcatgaactg
atgcacaatcagtacaacaggatgaaggaagaggaggatcactggcaggacgacctggcc
cgatggaaaaatcgaaggaggagtatttcccaggatctgatcaagaaggaggaggagagg
aagatgatggagcggctgatgtcgggagacacctgcccctcccacaggaggagaagcatc
aagacgtacagagagatagtggaggacaaggagcgccgtgaggaggagctgcgagacgcg
tacaggagagccagatccccggaggaggcgtcagtcatcctccagcgctacgcccagcgt
ttctccatcagtgaagcggtcctggaacgcctgcagctgccgaagctgctggatcgcagc
atctccgctgacccctccttcccctgctcgcccttccctctctccctcgccgcctccccg
acgaccccagaccccttcgacgtggaccccaatgggcctctgaggtatctgcgccagcag
tcggctccggctccaaagttcacgtccacgctggaggcgcggatcgaggagtttcccaaa
gacttgtcctcgcaccagcggcctcagattcgctcccgctcgtccgagccgccatccacc
cgagccctgtcgcccaaaccggtgcctttgctgacacccaagccttactttgagacccga
tccacagcggctgaaccgcggcccagcaaggcggacggtttgcttcgaatcaacggcaac
ataggaagcgacgacgttcccaccacacctgagagtcaaggaagggaatctcctcctcat
ttccaggcgtccccttccaaaaccagtaacagcacagtagacgctcgctcctcagcggcg
tcacccgcacacagtccacacgcctcccccgcgggaggaagcccagcgtcgacgaaggcc
aaggaggaggtacgaggcgccagtgaagcggcggctgaggacgtcagagaagagaagaaa
gtcgcagagcattcgacgccaccgagtcggcccacctcgctcccaacggaactgcagaag
ccggaggaaagctttgggaaggctggagtccagacagcagctgctcccgaggagaaaaag
tctgctgcagctcaaccagcaccagctgcagaagccaaacgagaacaagaaaaggctgaa
ccatctgatcaaagcatctccagtcttctccagtcgggcgtcggcacgcagcaaagtcag
ccggtgactttacagacaactgtccccactccccaggagctgtcacggagaagagagaac
gtaccgagcttacccgcaccaggatcgtctggatatcacccgccgcgggaaacgacggca
gagtttgcaaacagtgtcaggtctccgctggcaaccagcaaccctaagttacgttgggag
ttcttcgctccaccagaagaggcagaaaaggatcgccgtggaaacgtgtcagtgccggtg
ttgccccaggccaggcggggtgaccgctggtcttgggacccggatgaggagcgaaagcgt
caggaaaggtggcagcaagagcaggagcgcatgctgcaggagaagtaccggcgcgagcag
gagaagctgaaggaggagtgggagaaagcgcagagggaagtggccgaggaggagaggaag
taccatgaggaggagcgtaagatactggaggagactgtggcgcctctcactccccgctcc
tcagccctgccctcccccagccgaggggagctgtcctccaccgccgcgccccaggacacc
atcgtccgttcgctggctgactgggaacgtaaacaggaacttctggagaggcagtcgagg
gggagcacggagagcgtggaggcgaaacggagggaaaatgacaggactagtgacatcagc
actgctgacgacagcatgaagacagcaagaagctcgttgagtcagagcagcagtcagaca
ggaacactcacagctcacagtttgcagaacggccagaaacttcctgcggtgtcggccaaa
tcctcaactccggtgaagaagcaacaagatctcacagcagaaagcaacaagcccagccgg
cctgcaggagacaggaggagtggtcccattgataataacatgagccgcagctcatcaaag
cctcctgcagcatgttccccaactccagacacactgcctccaactcccaacaggtccgtc
agtgggaagaagctgtgctccagctgtgggcagccgctgggaaaaggggcggccatgatc
atagagaccctcagcctctacttccacatccactgctttaagtgtggggtgtgtaaggga
cagttaggcgacacgaccacggggacggacgtccgaattagaaacggcctcctcaactgc
caccagtgctacatccgctcccgctcggccggacagcccaccacattgtga
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