Seriola dumerili (greater amberjack): 111232463
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Entry
111232463 CDS
T05606
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111232463 (ssrp1)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111232463 (ssrp1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
111232463 (ssrp1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
111232463 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
111232463
NCBI-ProteinID:
XP_022615717
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDINDNTAFEVPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQADERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDESDGGSD
ESFNPGEEDDDIAEEYDSNASASDSSEEGDESEDESAKKKKAKKVSVVKEKKERKPRKEK
KQKDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWETK
AGEAKRQYDKAKKEYTESGGGSTSKKESKKSGGKKDEKKRKSAGADKDRERGGGNDSFKS
REFIETSEDSSDSDHKSKSKRKKESDDEEEEAVSTPASSEEDSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacattggagttcaacgagatttatcaggaggtgaaaggctcctggaatgac
gggcggctgcgtttcagcaagcaaaatgtggtttataaaagcagcaagacggggaaggtg
gacagcatcccggctggtgaactcaacttggctcagtggagacgagtgtgtctaggtcac
ggtatcaaactgggtaccagcacaggacacatttacaaatatgacggcttcagggacacg
gacttcgaaaggatctctgagtttttcaaggctaactacaaggtggagctaacagagaag
gacatgtgtgtgaagggctggaactggggaacagccaagttctcggggccactgttgtca
tttgatataaacgacaatacagcattcgaggttccgctatccaacgtctcccagtgtgcc
acagggaagaatgaagttactctggagtttcaccagaatgacgacacagaggtgtccctc
atggaggtcagattctacgtcccacctagccaggctgatgaacgacaagaccctgtcgag
gcgtttgcccagaatgtcttgtctaaggctgacgtgatccaggccacaggagatgcagtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatatgacattcgtatctac
ccgacgttccttcacctccatggtaagacctttgactacaagattccctacaccactgtc
ctccgtcttttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacacgttatcactttctgattctgctcttctccaag
gaagaggacatcaacctcaccctcaacatgagcgaggaggatgtggagcgtcggtttgag
ggcaaactcagtaagaacatgtcgggatcgctgtatgagatggtcagcagggtgatgaag
gcactggtcaaccgcaagatcactgtacccggaaacttccagggtcactctggtgctcag
tgcatcacctgctcctacaaggcgtcctcaggcctcctctacccactggagagaggcttc
atctacgtccacaagccgcctgtccacctgcgttttgaggagatttcctgtgtcaacttt
gcccgaggcaccaccacaacacgttccttcgactttgagattgagaccaagcagggaaac
cagtacaccttcagcagcattgagagagaagagtacggcaaactgtttgacttcgttaac
gccaagaagctcaacataaagaacagagggttcaaagagaagaagggcatgaagggtaaa
attgacgagtatagtgactccgacgatgaccagcacgatgcctacctggagaggatgaaa
gctgagggcaagatcagagaggagggcaacgacagtgacgaatcagatggtggaagtgat
gaatcgtttaacccaggagaagaagatgatgacattgcagaagagtacgacagcaatgcc
tcagcaagcgacagcagtgaagaaggggatgaaagtgaagatgagagtgcaaagaaaaag
aaggccaagaaagtcagtgtggtgaaggagaaaaaagaaaggaaaccacgcaaagagaag
aagcagaaagataccggcggtccaaagaggccgatgagtgcctacatgctgtggctgaac
tccagccgtgagcgaatcaagtcagagaatccaggcatctccatcacagagatctccaag
aaggccggagagatgtggagacaattgggcaaagacgagaaggaggaatgggaaacaaag
gcaggagaggccaagaggcagtacgacaaagcaaagaaagagtacacagagagcggtggt
ggatcaacctctaagaaggagagtaaaaagtctggaggtaaaaaggatgagaagaagagg
aagtctgccggtgcagacaaagacagggagcgaggaggaggcaatgacagcttcaagagc
cgcgagttcattgagaccagtgaggattcatcagactctgaccacaagagcaagtccaag
aggaagaaggaatcagatgatgaggaggaagaggccgtgtccacacccgctagctcagag
gaagactctgactaa
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