Seriola dumerili (greater amberjack): 111232486
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Entry
111232486 CDS
T05606
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111232486
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111232486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
TPR_11
HrpB1_HrpK
TPR_MalT
TPR_2
TPR_12
HAT
Motif
Other DBs
NCBI-GeneID:
111232486
NCBI-ProteinID:
XP_022615762
UniProt:
A0A3B4UXJ2
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAAEGGEELSGNGELEDSSAMEASEDPAPPPIEMAEMSEENGSAGAAPEAPVAPDPSSFS
MPPAVEDEEGELPADFERLWKAAHDNPQDFTSWTDLLQYCEQESHITASRRALVAFLARY
PLCYGYWKKFADLERRAGYNAKAEEVCVQGLQAIPLSVDLWIHYINLLLGTLDMNLPESP
KRIRSVFEDAVVAAGLDFHSDRLWDLYVEWEKEQGNMSNAAAVLDRVLKVPTQLYNTHYE
KFKEHLNSHEPKEVLSPEEYEELRTLCRQSQKAERAEQAQEEEEERPPGEEEPATPEGTD
TEELMQKIREQVLVRRDKVYQDNEGEVRKRWHFEDAIKRPYFHVKSLDRLQLRAWHSYLD
WEIAQLNKDTKDPNQDPNQAATEGSEVTAQTHEVSEDAAVALDDHRVRILFERCLIACAL
YEEFWTRYIQYLEPQSVDEARAVYKRACEVHLTYKPNIHMQWATFEERHGDLTEARRVLE
ALEKFLPGLAVVRLRRAALERRAGHLDQSEALLQDAVAESKEKPTLHAFYSIKLARLLLK
LERNPARARRVLQEALEISPDNDKLHLNLLELEVSGDPWASAEAVQECVTRALAAPLAPH
TKILFSQRGLQFAEDYSNSIQSVLSVYEDHQKLLKELGGTKRGAENGDEDSEKLSKSEDG
SAVAVSTQVPPTMPHVPITTPPPTMMGTDMSAQTGYGGYSSWYQQPQYGSYGYQNTWNYN
QGYYPPS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaaggcggtgaggagctgagcggcaacggggagctcgaagattcttcagcc
atggaggcttctgaggatccagcaccgcctccaattgagatggccgagatgtcagaagag
aacggcagtgccggcgcagcccctgaggctccagtggctcccgacccttcttctttctcc
atgcctccagctgtagaggatgaggagggcgaactgcctgctgactttgagcgtctgtgg
aaggccgcccatgacaatcctcaagacttcaccagctggactgacctcctgcaatactgc
gagcaagagagtcacatcacagcgtcacgcagagctctggtggcctttctcgctcgctac
ccgctctgctatggctactggaagaaatttgctgatctggagcgccgtgcagggtacaac
gctaaagcagaggaggtgtgtgttcagggtctccaggctatccctctgagtgtagatctg
tggattcactacatcaatctgctgctgggaacactggacatgaacctgcctgagtcgcca
aagcggattcgcagtgtgtttgaggacgccgttgtggcagcaggtctggacttccactca
gaccggctttgggatctgtatgttgagtgggagaaggagcaggggaacatgagcaacgca
gcagccgttctggacagagtcctcaaagttcccacccagctctataacacgcactacgag
aagttcaaggagcacctgaacagccatgagcccaaagaggttctttctccagaggagtac
gaggagctgaggacgttgtgccgccagagccagaaggcagagcgcgctgaacaggcccag
gaggaggaggaggaaaggccaccgggggaggaagagcccgccacgcctgagggcacagac
acagaggaactgatgcagaagatcagggaacaagtgctggttcgcagggacaaagtgtac
caggacaacgagggagaagtccgcaagagatggcactttgaagacgctatcaagcggccc
tacttccacgtcaagtcactcgaccggctccagctgcgagcctggcactcctacctggac
tgggaaattgctcagctgaacaaggacaccaaagaccccaaccaagatccaaaccaggca
gccacagaggggtcagaggtcacggctcagacccacgaagtgtcagaggatgctgcagtt
gcccttgacgaccacagggttcgcatcctctttgagcgttgcctaatcgcttgcgctctg
tatgaggagttctggaccaggtacattcagtacctggagccgcagagtgtggacgaagcc
cgagctgtttacaaacgagcctgtgaggttcacctgacatataaacccaacatccacatg
cagtgggccaccttcgaggagaggcacggtgatttaactgaggctcggcgagtgctggag
gccctggagaaattcctgcctgggttggcagtggtccgtctccgcagggccgctctggag
agacgagcaggccatctggaccaatcggaggccttgctgcaggatgcggtggctgaatcc
aaagagaagcccacgttacacgctttctactccatcaagctggctcgcctgttgctgaag
ctcgagaggaaccccgccagagcccgcagagttttacaggaggcgctggagattagtccg
gataatgataaactgcacttgaacctgttagagctggaggtgtcgggggacccctgggcc
tctgctgaggcagtgcaggagtgtgtgacgcgagctctggcagcgcctctcgccccacac
accaagatcctcttttcacagagaggcctgcagttcgcagaggactacagcaactctatc
cagagtgtgctgtctgtctacgaagatcaccagaaactgttgaaggagctcggtggaaca
aagagaggagcagaaaacggggacgaggactcggagaaactgagcaaaagtgaggacggc
tctgctgttgccgtgtccacacaagtcccacctaccatgccgcacgtccccatcaccacg
ccccctccaactatgatgggcaccgacatgagcgcacagactggctacgggggatacagc
agttggtaccagcaaccgcagtacggcagctacggctaccagaacacctggaactacaac
cagggctactatcctcccagctaa
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