Seriola dumerili (greater amberjack): 111232489
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Entry
111232489 CDS
T05606
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111232489 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111232489 (neil3)
Enzymes [BR:
sdu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111232489 (neil3)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111232489 (neil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Zn_ribbon_RanBP
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
111232489
NCBI-ProteinID:
XP_022615764
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MVEGPGCTLNGEKIRSKVQKGQKLKEIRGSLTTSSKNNPGGHVFHSFYGCLYTGVETLGK
ELFMYFGPRALRVHFGMNGSMRINPAERKDRMGTIPVLEIHLTNDIVCFFDSTVEMRLTE
DCEQRMRAMESLDVCSPKFSFSHSEEAVRSQSSRMLCDVLLDQAVMPGVGNIIKNEVLFD
SGLHPAVKVQQLTDEQIHHMVKMTRDFTLLFYKCRKSGSPLYKHYKVYKRSQCGQCFHVI
TVCRLGDNGRMTYFCERCQKGDPSRVDISKLPVRNRLTNWVYNDRTNDNVAKKEEEDWAC
QLCTLINQPAAKACDACLTPRPEVHKDNISTEASPFTTDLIKYPCTAFKKPQEELKVNWR
SAFGTSTLVFSDLSKKPKPVNSPLSPAGSHLNSLAAEQGLYKYSVCQGTTSPNYASGGWQ
KQSAELSNGESLASYSHPSKKMRIDHSPFPSNNAQNGTPNTGTHRMGATSRGSSISSSPS
APCCASHSRPAVLRVVHKEGENKGRQFYACSLPRETKCNFFEWADLHFPSCHHGKRCLMR
TVLKLGPNNGRNFYTCSFQKGKQCDFFQWAENGPGVSILPGC
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggtccaggctgcacattaaacggagagaaaatccgatccaaagtccagaaa
gggcagaaactgaaagaaatcagaggcagtttgacaacatcgtccaaaaacaaccccggg
ggacatgtcttccacagtttctatggttgtctgtacaccggtgtagaaactctggggaag
gagctcttcatgtacttcggtccaagagcgttgagggtccactttggtatgaatggatca
atgcgtataaaccctgctgagaggaaggataggatgggcaccataccagtgctggaaata
cacctgactaacgacattgtgtgcttctttgacagcactgtggaaatgaggttgacagaa
gactgtgagcagaggatgagggctatggagagtctggatgtgtgctcccctaagttcagc
ttctcccactctgaggaggcagtgaggagccaaagtagcaggatgctctgtgacgttctc
ctagaccaggccgtcatgccgggagtcggcaacatcattaaaaacgaagtcctgtttgac
tcgggcctccacccagccgtgaaggttcagcagctgacagacgaacagatccaccacatg
gtgaaaatgacacgtgattttactcttctgttttataagtgtcgcaaatctggctctccc
ctctacaaacattacaaagtctacaagcgttcccagtgcggccagtgctttcatgtcatc
acagtctgtcgtcttggagacaacggcaggatgacttacttctgtgagcgctgtcagaag
ggagatcccagcagggttgacatcagtaagctcccagtcagaaaccgtctgactaactgg
gtatacaatgacagaaccaatgataatgtggctaagaaggaggaagaggactgggcctgt
cagctctgcacgctcatcaaccagccagcagcaaaagcctgtgatgcatgcctcactcca
agacctgaggtccacaaagacaacattagcactgaggcatcaccgttcaccactgatttg
attaagtacccttgcactgctttcaagaaaccacaagaggagctcaaagtcaactggagg
tctgccttcgggacttccacccttgttttctctgacttgagcaagaagccaaagcctgta
aactccccgctctccccagccggcagtcatttgaattccttggcggcagaacaaggttta
tataaatacagcgtctgccaagggacaacaagccccaattatgcctctggtggctggcag
aagcaaagtgccgagctctccaatggggaatcactggcctcctacagtcacccatccaag
aaaatgagaattgatcacagtccctttcccagtaacaatgctcaaaatggaacccccaac
accggtacccacagaatgggagctacaagccgcggctcctctatttcttccagtcccagt
gccccttgttgtgcatcccatagtcgtccagctgtcctcagagtggtccataaggagggg
gagaataagggacgacagttctatgcctgctcgcttcccagagagaccaaatgtaacttc
tttgagtgggcagacttgcacttcccttcttgtcaccatggtaaacgctgtttaatgagg
actgttctgaaactaggacccaacaatggccggaatttctacacctgcagctttcaaaag
ggtaaacagtgtgacttttttcagtgggcagagaatggaccaggggtatccatcctccct
ggttgttaa
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