Seriola dumerili (greater amberjack): 111232682
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Entry
111232682 CDS
T05606
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111232682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111232682
03016 Transfer RNA biogenesis [BR:
sdu03016
]
111232682
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
111232682
Transfer RNA biogenesis [BR:
sdu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
111232682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
111232682
NCBI-ProteinID:
XP_022616029
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MNYTKVKEEDDDSEEAVFIVDTNSSDGEGVIELSDRKHQSSCKWLSREGSPPLLLAFTSG
RAPVESSCPSPASSTALQEEEEEEEEDSEQPVEEWMILGGEEQVGDSSIQLNLGHWSSSE
DESGDEDPNFKSVKDTWAVSEKDKGGADQSLSSRYFGPGRSLICQICNRTGHLAKSCYYH
KKCPTCVLCGVKGHIQKICPSRPCPSCGLPAHGLRLCEKPPVWNQHCQRCGMTGHLSDAC
PDTWRQYHLTIRLEVPLRPRTIRRFKHKRCLAHCYNCSKRGHYGYECTKRRMVSRTFPSL
PYVCHYDTIDDILQCRTGMQGKAKELVSAGSMGTSDQHHLSEPTGESGEENQPIKGRSRT
KQETCRRAGRRKTWPERRRERQEMKRLRRGAQSRREGGLLERSWRNSDDEACHSDPFKSP
LHGHRQSAPPPQKRKREETGGRKSRKSKEAERWKKRRGIKRGDLYPHGNIDIGSENLLSP
KQRVRHRRR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaactacactaaggtaaaggaagaggatgatgacagcgaggaggcagtctttattgtg
gacaccaatagttcagatggtgaaggagtgatcgagttaagtgaccggaaacatcagagc
agctgtaaatggctcagcagggaaggctctcctccacttctcttggcattcacctctgga
cgggctccggtggagagcagctgccccagtccagcttccagtactgccttacaggaggag
gaggaggaggaggaggaggacagtgagcagcccgtcgaggaatggatgatcctgggagga
gaggagcaggtgggagactcaagcatccagctcaaccttggccactggagcagctctgag
gatgaatctggagatgaagatccaaattttaagtcagttaaagatacttgggctgtatca
gaaaaagacaagggtggcgctgatcagtctctgtccagccgctattttgggcctggtcgt
tctctgatctgtcaaatctgcaacaggacgggacacctcgccaaaagctgctactaccat
aagaaatgtcccacctgcgtcctttgtggggtcaaggggcacatccagaagatatgtcca
agccgcccctgccccagctgtgggctgcctgcacatggtctcagactgtgtgaaaagccc
ccagtatggaaccaacactgccaacgttgtgggatgacaggacacctctctgatgcctgt
cctgatacatggagacaataccacttgacgattcggttagaggttcccctcaggccacgg
accatccgcaggttcaaacataagagatgcctcgctcattgttacaactgctctaagagg
ggacattatggctatgaatgcactaaaaggaggatggtcagtcggacttttccttcactg
ccttacgtttgccactatgacaccattgatgacatcctccaatgtcgtaccgggatgcag
ggaaaagccaaagagcttgtgagtgctggatccatgggtacttccgaccagcatcacttg
tctgaaccaacaggggagagtggtgaggagaatcagccgatcaaggggaggagcagaaca
aagcaggagacctgtaggcgagctggcaggaggaagacatggccagagaggcgtagagag
agacaggagatgaagagactaaggagaggggctcaatccagacgagaaggaggactactg
gagaggtcctggcgtaactctgatgacgaagcatgccactcagaccccttcaagtctccc
ctccatggtcaccggcagtccgcacccccaccacagaagaggaagagggaggagacaggt
ggcagaaagagtaggaagagcaaagaggcggagaggtggaagaagagacgggggataaaa
cgtggggatttgtatcctcatggcaacatagacatcggaagtgaaaaccttctctcccca
aagcaaagagtacgccacagaagaagataa
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