Seriola dumerili (greater amberjack): 111232835
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Entry
111232835 CDS
T05606
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111232835 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdu01007
]
111232835 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdu03016
]
111232835 (farsb)
Enzymes [BR:
sdu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
111232835 (farsb)
Amino acid related enzymes [BR:
sdu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
111232835 (farsb)
Transfer RNA biogenesis [BR:
sdu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111232835 (farsb)
Prokaryotic type
111232835 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
B3_4
EF-1_beta_acid
Arc1p_N_like
EAD7
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
111232835
NCBI-ProteinID:
XP_022616218
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MPTVGVKRDLLFKALGRTYTDEEFDELCFEFGLELDEITSEKEIISREQGDTKASGASDI
ILYKIDVPANRYDLLCLEGLVRGLQVFKNRLEAPRYRRVSPVSGEPQKLIITKETAAVRP
FAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPG
DICFKPLNQTKEYTATQLMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNGVVLSMPPIING
DHSKITLKTKNVFIECTATDVTKAKIVLDMMVTMFSEYCSQPFTVEEAEVVYPDGKTCIY
PELAYRKEKLSSEFVNRKVGINESTEKIAQLLTRMCLLSQATGVGDEIEVEIPPTRSDVI
HACDIMEDAAIAYGFNNITRTTPRTYTIANQFPLNKLTELLRQDLAAAGFTEALNFALCS
QEDIADKLGKKISETKAAHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISD
VVLKDDTKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEVKSACGEGYHIQAADD
STFFPGRCAEIFVRGKSVGRLGVLHPDVINRFELTMPCSALEMDIEPFLGHTAETLLTHD
VPMQEVIPHRFPALSDSCQAPASRPTSTKTVFGDMSTPAGLKALDEFLADKSYVEGFAAS
QADMAVFDAIPSAPSLTFCHLLRWYKHIKSFQRERASLASAKSQFVLPAAPAASTNNASD
DDDDDDIDLFGSDDEAESAEAERIKEQRLAEYAAKKSKKPALVAKSSILLDVKPWDDETD
MAKLEECVRSVSMDGLLWGQSKLVPVGYGIKKLQIGCVVEDEKVGTDLLEEAITTFEEYV
QSVDVAAFNKI
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaaaagggatcttctcttcaaagctttgggcagaacgtacact
gatgaggagtttgacgagctgtgctttgaatttgggctggagctggatgaaattacctca
gagaaggagataatcagccgtgagcagggtgacaccaaggcatcaggagcatctgacatc
atcctgtacaagatcgatgtaccagctaaccgctatgacctgctgtgtctggaggggctg
gtccgtggactgcaggtcttcaagaataggctggaggcgcctcgctacagacgtgtcagc
ccagtcagcggggagcctcagaagctgatcatcactaaggagactgcagcagtgcgaccc
tttgcagtggcagcagtgctgaggaacatcaccttcacacaggagcgctacgacagcttc
attgagctgcaggagaaactccaccaaaacatctgcaggaagaggagcctggtggcgatc
gggacccatgacctggacaccatctccggccctttcacatacacagccaaacctcctgga
gacatctgcttcaaacccctcaaccagaccaaagagtacaccgccacccagctgatgagc
ctctacaagactgacagccacttgaggcattaccttcacatcatcgaagacaagcctgtg
tacccggtcatctacgacagcaacggcgttgtcctgtccatgcctcccatcatcaatggg
gaccattcaaaaatcaccctgaagacaaagaacgttttcatcgagtgcacagccacagat
gtgaccaaggcaaagatcgtcttggacatgatggtaaccatgttcagcgagtattgttca
cagcctttcacggtagaggaggctgaggtggtgtacccagatggcaagacctgcatatac
ccagagctggcgtacaggaaggagaagctgtccagcgagttcgtcaaccgtaaagtcggc
atcaatgagtcaactgagaaaatcgcgcagctcctgaccaggatgtgcctgctctcccag
gcgacaggtgttggtgatgagatcgaggtcgagatcccgcccacgcgctccgacgtcatc
catgcctgtgatatcatggaagacgccgccatcgcctacggcttcaacaacatcacccgc
accacgccgcgcacatacaccatcgccaaccagttcccactgaataaactgacagagctg
ttgaggcaagacctggcagctgctgggttcacagaggctctcaactttgctttgtgttct
caagaagatatcgcagacaagcttgggaagaagatctccgaaacaaaggctgctcacatc
tccaaccccaagacggctgagttccaggtggcgcgcaccaccctcctgccaggtctcctg
aaaacaatagctgccaacaggaagatgccgcttcccctcaaactgtttgagatatctgat
gtggtgctgaaggatgacaccaaagatgtcggggcgaggaacagccggcgtttctgcgcc
gtgtactacaacaagagcccgggcttcgaggtgatccacggcctgctggaccgaaccatg
caactgctggaggtgaagtctgcctgcggcgagggctaccacatccaggctgcagacgat
tccaccttttttcccggccgctgtgcagagatctttgtccgcggaaagagcgtcgggcgt
ctcggagtcctccacccagacgtcatcaaccgcttcgagctgaccatgccctgctccgcc
ctggagatggacatcgagcccttccttggccacactgctgaaaccctcctcacacacgac
gtccccatgcaggaagtcatcccgcacaggttccccgcgctaagcgactcctgtcaggcc
ccggcttcccgcccgacctctacaaaaactgtgttcggtgacatgagcacgccagccggt
ctcaaagctctcgatgagtttctggcggacaaaagctacgtggagggctttgcagcatct
caagctgacatggcagtgtttgatgccatcccttctgctccgtcgctgaccttctgccac
ctcctgcgctggtacaagcacatcaagtccttccagagggaaagagctagcctggcgtca
gccaagagtcagtttgtcctcccagccgcccccgccgcctccacaaacaacgccagtgat
gacgacgacgacgacgacatcgacctatttggctcggacgacgaggcagagagcgcagag
gcggagagaatcaaggagcagcgactcgccgagtacgccgccaagaagtccaagaagcca
gctctcgtcgccaagtcctccatcctgctcgacgtcaagccctgggacgacgagacggac
atggccaagctggaggagtgcgtccgcagcgtcagcatggacgggctgctgtgggggcag
tccaagctggtcccagtgggctacggcatcaagaagctccagataggatgcgtagtggag
gacgaaaaagtgggtacggatctcctggaggaagccatcaccacctttgaggagtatgtt
cagtctgtggatgttgctgctttcaacaagatctga
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