Seriola dumerili (greater amberjack): 111232903
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Entry
111232903 CDS
T05606
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111232903 (ddx4)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111232903 (ddx4)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111232903 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111232903
NCBI-ProteinID:
XP_022616322
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MDEWEEEETSTSSVTLTSHASSQGRGGRGRGRRGGFSSSFSSGGDEHGHDGDSWNNTVGE
RGGFRGRGGRGRGFGGMDCIEFGGGDDGVCENGFRGGSRGVRGSRGGRGFRQGGDQGGRG
GFGGGYRGKDEQIFARGEDKDPDKKDGNDGDRPKVTYVPPTLPEDEDSIFAHYESGINFN
KYDDILVDVSGTNPPQAIMTFAEAALCESLSKNVSKSGYVKPTPVQKHGIPIISAGRDLM
ACAQTGSGKTAAFLLPILQQLMADGVAASQFSELQEPEAIIVAPTRELINQIYLEARKFA
FGTCVRPVVVYGGVSTGHQIREICRGCNVLCGTPGRLLDVIGRGKVGLHKLRYLVLDEAD
RMLDMGFEPDMRRLVGSPGMPSKENRQTLMFSATYPEDIQRMAADFLKTDYLFLAVGVVG
GACSDVEQKFIEVTKFSKREQLLDILKTTGTERTMVFVETKRQADFIATFLCQEKVPTTS
IHGDREQREREQALADFRAGKCPVLVATSVAARGLDIPDVQHVVNFDLPNNIDEYVHRIG
RTGRCGNTGRAVSFYDPDADGQLAGSLVSILSKAQQEVPSWLEECVFSGSSSSGVNPSRR
TFASTDSRKGPQGSSFQDSSMTSQPAVPAAADDEDWE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagaagaggaaacttctactagttctgtcacactaaccagccacgcc
tcaagtcaaggtcggggtggaagaggccgaggcagacgaggaggattttcaagttcattc
tcctcaggtggtgatgagcatggacacgatggtgacagctggaacaacacagtaggagaa
agaggtggattcagaggcagaggaggtcgcggcagaggatttggtggaatggattgcatt
gaattcggtggaggagatgatggagtgtgtgaaaatgggtttagaggaggaagccgagga
gtacgaggcagcaggggaggacgaggcttcagacaaggtggagaccagggaggcagagga
ggctttggaggaggttacagaggaaaagatgaacagatctttgctcgaggagaagataaa
gatccagataagaaggatgggaacgatggtgacagaccaaaggtcacctacgtccctcca
actctccctgaggatgaagactccatctttgcccactatgagtcaggcatcaatttcaac
aagtatgacgacattctggttgacgtcagtggaaccaacccaccacaggccatcatgacc
tttgctgaggcagcactgtgtgagtccctgagtaaaaacgtcagtaaatctggttacgtg
aagccgactcctgtgcagaagcacggcatccccatcatctctgccggcagagatctcatg
gcctgtgcccagactggatctggtaaaacggctgcgttcctgttgcccatcctacagcag
ctgatggcagacggcgtggcagccagtcagttcagtgaactgcaggagcctgaagcaatc
atcgtcgctccaaccagggagctcatcaaccagatctacctggaggccaggaagttcgcc
tttgggacctgtgtgcgcccagtggtggtttatggtggagtcagcactggacaccagatc
agggaaatatgcagaggatgcaacgtcctgtgtggaactccagggagactactggatgtg
attggacgaggaaaggtggggctgcacaagctgcgctacctggtgctggatgaggctgac
cgcatgctggatatgggctttgagcctgacatgcgccgcctggtgggctcccctgggatg
ccctccaaagagaatcgtcagaccctgatgttcagcgcaacctaccccgaggacatccag
aggatggcagctgacttcctcaagaccgactacctgttcttagctgtgggcgtagtgggt
ggagcctgcagtgatgtggagcagaagtttattgaagtaactaagttctccaagagggag
cagcttcttgacatcctgaagacaacaggaacggagcgcaccatggtgtttgtggagacc
aagagacaggctgattttattgccacattcttgtgccaggagaaggttccaactaccagc
atccatggagaccgggagcagcgggaacgggagcaggccctggcagacttccgcgctggg
aaatgtccagtcctggtggcaacctctgttgctgcccgtggtctggatattccagatgtt
cagcatgtggtgaactttgacctccccaacaacatagacgaatacgtccaccgtattggg
agaactggccgctgtggaaacactggaagggcggtgtcattctatgacccagacgctgat
ggacagctggctgggtcccttgtcagcatcctgtccaaggcccagcaggaagtgccctcc
tggttagaggagtgtgtgttcagcggctccagtagctcaggtgtgaacccctccaggagg
acctttgcgtccacagactccaggaagggtccacagggcagctcctttcaggacagcagt
atgacgagccagccggctgttcctgctgcagctgatgatgaagactgggagtag
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integrated database retrieval system
