Seriola dumerili (greater amberjack): 111232936
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Entry
111232936 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sdu04054
]
111232936
Pattern recognition receptors [BR:
sdu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111232936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
SPRY
NOD2_WH
LRR_4
PRY
Motif
Other DBs
NCBI-GeneID:
111232936
NCBI-ProteinID:
XP_022616364
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MDQWEETEEGAPLCGEHETQTKAQRPEQQQRPDSPGPGPEPSCVSIKSHQSMDPSLLSEG
ELPSETHVLQQRPDSPVPSCVSMKSERSMSKSLDFRDDHHSTGERVLQQRPDSPVPSCVS
MKSERSMSKSLNFRDDHHSTEERVQQQSLEFLHGQSAQQHLADLDSVFMDCYSFPTELKK
FQKVLSPDYPECWRRQNGDKEEGEQSTREAFLEITLYFLRRMKQDDLAESLQRTTAAVCQ
RQLKSSLKKKFQCVFEGIAKAGNPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKP
VRPETTIRQEDIFKASPGRDGPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIQFTF
PFTFRELNLLKERKFSLVELVHHFFTETKEAGICRFDQFQVVFIFDGLDECRLPLDFHNT
EILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQ
KEEYFRKRFRDEEQASSIISHIKTSRSLHIMCHIPVFCWITATVLEEVLKTREGGELPKT
LTEMYIHFLVVQSKLKKVKYDGGSETDPHWSPESRKMIESLGKLAFEQLQKGNLIFYESD
LTECGIDIRAASEYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINSGVN
LLSEEQSTSWWSKLFRNKPEPTLFYQRAVDEALQSPNGHLDLFLRFLLGLSLQTNQTLLR
GLMTQTGSGSQTNQETVNYIKKEINENPFPERSINLFHCLNELNDRSLVEQIQQSLRSGR
LSTDKLSPAQWSALVFILLSSEEDLDVFDLNKYSGSEEALLRLLPVVKASNKAVLSGCNL
SERSCGALSSVLSSQSSRLRELDLSNNNLQDSGMKLLSAGLKSTNCTLKTVRLSQTGLTK
KCCQGLSAVLSSKSSSLRELDLSNNKLQDSGLKLLSTGLESSHCTLETLRLNGCNLSERS
SEALSSVLGSQSSRLRELDLSKNSLQDSGVKLLSAGLKHSYCKLEVLRLRQTGITKKSLQ
ELSLFLKSQSSCLRDLDVSYKDLLDSGTEIPRRVGVFVDYPAGTLSFYRVSSNTRLLLHT
VNTTFTQPLYPGLSQTRLTDDGCEQISSVLRSQSFRLRELDPSNNDLQDSDLKLLFPGLK
SPNCKLETLRLSGCNLSERSCEALASVLSSQSFRLRELDLSNNNLQDSGVKLLSAGLKSP
HCALETLRVSGCLVTEEGCSSLVSALRSNPSHLRELDLSYNHPGDSGVKLLSAELEDPQC
RLETFRYEQTLTSTLDACELTLDTNTVNKNLKLFDNNQTVTTVKEQQPYPDHPHRFANWQ
LLREDGLTGRHYWEVEWTGKVDVAVAYRNNRRRGCRDHCKFGVNGRSWSLLCSDGDRYTV
WHNNRRTDLPPSSSSPPPSVSNRVAVYVDCPTGSLSFYRVSSDSLIHLHTFSTTFTQPVY
PASGFWGFGSSVSLCSPEEAGSLV
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgggaggagacggaggagggagcccccctgtgtggggaacatgagactcag
accaaagctcagaggccagagcagcagcagagaccagactctcctggacctggacctgaa
cccagctgtgtgtccatcaagagccaccagtccatggatccatctttgctgtctgaagga
gaacttccctctgaaactcacgttcttcagcagagaccagactctcctgtacccagctgt
gtgtccatgaagagtgagaggtccatgtcgaaatctcttgacttcagagatgatcaccac
tctactggagaacgcgttcttcagcagagaccagactctcctgtacccagctgtgtgtcc
atgaagagtgagaggtccatgtcgaaatctcttaacttcagagatgatcaccactctact
gaagaacgagttcagcagcaaagcttagagtttctccatggtcagtctgcacagcagcat
ctggcagacctggactctgtatttatggactgttattcttttccaactgagctgaagaag
ttccagaaggttctgagtccagattacccagaatgctggaggaggcagaatggggataag
gaagagggagagcagagcaccagagaagcatttctggagatcaccttatacttcctgagg
agaatgaagcaggatgatctggctgaaagtctgcagagaactactgctgcagtttgtcaa
cgtcaactcaaatctagcctgaagaagaagttccagtgtgtgtttgaggggatcgctaaa
gcaggaaacccaacccttctgaaccagatctacacagagctctacatcacagagggaggg
actggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaacca
gtcagaccagaaacaaccatcagacaagaagacatctttaaagcctcacctggaagagac
ggaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaaca
cagaagttcactctggactgggctgaagacaaagccaaccaggacatacagttcacattt
ccattcaccttcagagagctgaatttgctgaaagagagaaagttcagcttggtggaactt
gttcatcacttctttactgaaaccaaagaagcaggaatctgcaggtttgatcagttccag
gtcgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacact
gagatcctgactgatgttacagagtccacctcagtggacgtgctgctgacaaacctcatc
agggggaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaat
cagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcactgacccacag
aaggaggagtacttcaggaagaggttcagagatgaggagcaggccagcagcatcatctcc
cacatcaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatc
actgctacagttctggaggaggtgttgaaaaccagagagggaggagagctgcccaagacc
ctgactgagatgtacatccacttcctggtggttcagtccaaactgaagaaggtcaagtat
gatggaggatctgagacagatccacactggagtccagagagcaggaagatgattgagtct
ctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaatcagac
ctgacagagtgtggcatcgatatcagagcagcctcagagtactcaggagtgttcacacag
atctttaaagaggagagaggcctgtaccaggacaaggtgttctgcttcgtccatctgagt
gttcaggagtttctggctgctcttcatgtccatctgaccttcatcaactctggagtcaat
ctgctgtcagaagaacaatcaacctcctggtggtctaaactgttcagaaacaaacctgaa
ccaacactcttctaccagagagctgtggacgaggccttacagagtccaaatggacacctg
gacttgttccttcgcttcctcctgggtctttcactgcagaccaatcagactctcctacga
ggtctgatgacacagacaggaagtggctcacagaccaatcaggaaacagtgaactacatc
aagaaggagatcaatgagaatccgtttccagagagaagcatcaacctgttccactgtctg
aatgaactgaatgatcgttctctagtggagcagatccaacagtccctgagatcaggacgt
ctctccacagataaactgtctcctgctcaatggtcagctctggtcttcatcttactgtcc
tcggaagaagatctggacgtgtttgacctgaacaaatactctggttcagaggaggctctt
ctgaggctgctgccagtggtcaaagcctccaacaaagctgtgctgagtggctgtaatctg
tcagagagaagctgtggagctctgagctcagttctcagctcccagtcctctagactgaga
gaactggacctgagtaacaacaacctgcaggattcaggaatgaagctgctctctgctgga
ctgaagagtacaaactgtacactaaagactgtcagattaagtcaaactgggctcacaaag
aaatgctgtcagggtctctcagcagttctcagctccaagtcctctagtctgagggagctg
gacctgagtaacaacaaactgcaagattcaggcttgaagctgctatctactggactggag
agttcacattgcacgctggagactctcaggttgaatggctgtaatctgtcagagagaagc
agtgaagctctgtcgtcagttctcggctcccagtcctctagactgagagaactggacctg
agtaagaacagcttgcaggattcaggggtgaagctgctctctgctggacttaagcactca
tactgtaaactggaagttctcaggttgcgtcaaaccgggatcacaaagaaaagccttcag
gagttgtcattgtttctcaaatcccagtcctcttgtctgagagacctggacgtgagttac
aaagacctgctggattcaggaacggaaattcccagaagagtaggagtatttgtggactat
ccagctggcacactgtccttctacagggtctcctctaacacacggctcctcctccacacc
gtcaacaccacattcactcaacctctttaccctgggttgtctcaaaccagactgacagat
gatggctgtgagcagatctcatcagttctcagatcccagtcctttagactgagagaactg
gacccgagtaataacgacctgcaggattcagatttgaaactgctctttcctggactgaaa
agtccaaactgtaaactggagactctcaggttgagtggctgtaatctgtcagagagaagc
tgtgaagctctggcctcagttctcagctcccagtcctttagacttagagaactggacctg
agtaacaacaacctgcaggattcaggggtgaagctgctgtctgctggtctgaagagtcca
cactgtgcactggagactctcagggtgtcaggctgtcttgtcactgaggaaggttgttct
tctctggtctcggctctaaggtccaacccctcccatctgagagagctggacctgagctac
aatcatccaggagactcaggagtgaagctgctgtctgcagaactggaggatccacagtgt
agactagagactttcaggtatgaacagacattaacatcaactctcgacgcctgtgaactc
acactggacacaaacacagtgaacaaaaacctcaaactgtttgacaacaaccagacggtg
acaacagtaaaggagcaacagccgtatcctgatcatccgcacaggtttgccaactggcag
ctgctgcgtgaagatggtctgactggtcgccactactgggaggtggagtggacaggaaag
gttgatgtagcagtggcttatagaaacaacagaaggagaggatgcagggatcactgcaaa
tttggagtgaacggtcggtcctggagtctcctctgctctgatggtgatcgttacactgtg
tggcacaataacagaagaacagacctccctccttcctcctcctccccccccccctctgtc
tctaacagagtagcagtgtatgtggactgtcctactggctctctgtccttctacagagtc
tcctctgactcgctgatccacctccacaccttcagcaccaccttcactcaacctgtctat
cctgcatctgggttctggggctttggttcgtcagtgtctctgtgttcaccggaggaagct
ggttctcttgtttag
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integrated database retrieval system
