Seriola dumerili (greater amberjack): 111233050
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Entry
111233050 CDS
T05606
Symbol
pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111233050 (pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111233050 (pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111233050 (pcdh7)
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111233050 (pcdh7)
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111233050 (pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Gp80
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
111233050
NCBI-ProteinID:
XP_022616504
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MRTTGAVDYLYYCMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVAADLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSYSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNSILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGQNAEMSLFIEEEEDIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVLATDTDTGINADLNYSIIGGNPFKLFEIDGGSGVISLVGKLEQKHYG
LHRLVVQVNDRGQPSQTTTTLVHVYVNETLSNSTVVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQGPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPED
SYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSK
STTNPQQPKLSTFMSGSGSGSSSAEQPGSQETLAMAAMANGDPTAAHMMGDRNRNLLNKK
MASSSSSYEAFGSPSYGSPGGGEEALGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactattgcatgctcatcctgcagcttgtg
catcagcccgctgccaagcaagtgctccggtaccgtttggctgaggagggacccgctgat
gtcagagtaggaaacgtagccgccgacctgggcattgttgccgggtccggcgaggtgaca
ttcacgctcgaatcgggctcagattttttcaaaattgacaacataacaggtgagctcacc
accaacgagaggcggatagaccgtgaaaaattacagcagtgccaaatgatatttgatgag
aatgagtgttttatagattttgaagtgtcagtcatcggaccagcccagagctgggtcgac
ctctttgagggaaaagtcatcatattagatataaatgataacaccccgtctttcccttcc
cctgtcctgacactgtctgtggaggagaacagacccattggaaccctttatctgctgccc
actgccacagacagagattttggcagaaatggaatagagagatacgagcttatccaggac
aatggggagaactcaaggcgcctgggctcctctggggattcgtactcggggaagaggagg
tttgaggaaggcgcaagcaggagcagcgtcttcgagctgcaagttgctgacactactgat
ggagagaaacagcctcaactcatcattaaaggggcccttgatagggaacagagagactcc
tatgagctcacactgcgtgttagggatggaggagatccccctcgctcttcccaggccatt
ctgagggtgatgatcactgatgtgaatgacaacagcccccggttcgagaagagtgtgtat
gaggctgacctaccagaaaacagctccccaggcgcccccatcctacagctcaaagcggcc
gatgcagacgtgggggttaatggtcaaatagagtatgtgtttggggcagccacagagtca
gtgaggaggctgctgaggttggatgagagcacagggtggctgagtgtgttgcaccgcatt
gaccgtgaagaagtgagccaactgaggttcacagtaatggcccgtgacagaggccagccg
cccaaaatggacaaggccactgtggtgttgaacatcaaggacgagaatgacaacgtcccc
gccatagagatacggaaaattggacgcattttcttaaaagatggtatagccaacgtggct
gaggatgtggtggtggacacacccattgccttagttcaggtgtcagaccgtgaccagggg
gaaaatggcatagtgacctgcacagtggtaggggatgttccctttcagctcaaaccagcc
agtgaaatggagggtgagcagaataaaaagaaatacttcctccacacgtctgcaccactg
gactatgaagccacacaggaatacaatgtggtcatagtggctgtggactctggaagcccc
agtctggcaagtaataactctcttatcgtcaaagtgggcgacactaatgacaaccctccc
atcttcagccagaatgtagtagaggtgtcgtttccggaaaacaatgccccaggcgagagg
gtgacaacggtggcagccatcgacgcagatagtgggaagaacgctgaaatagcctattcc
cttgactcatcagtaaatgggattttctctatcgatgcagacagtggagacatccgagta
aacagcattctggatagagagcaaacagagcgctacgaattcaaagtgatagccaaagat
aagggcataaacacccttcagggctctgcaacagtggttgtccttgtggccgataagaat
gacaacgaaccaaagttcatgcaggatgtgttcaccttctatgtcaaagagaaccttgag
ccaaacagcccagttggcatggttacagtcattgatgcagataaaggccaaaatgctgag
atgagtcttttcattgaagaagaagaggacattttttctattgagaacgacactgggact
attttctccaccctatcctttgaccgagagcagaaaaccacatacaccttccgagtcaaa
gctgtggatggcggtgaccctcccagatccgccaccgccacggtttcactctttgtcatg
gatgaaaatgacaatgcaccaacggtcactttcccaattaacagctcctacaccctcctt
cctccttccagtaacatcagaacagtagtcagaacggtcttagccaccgacactgacacc
ggcatcaacgcagacctgaactacagcatcattgggggaaaccccttcaagctgtttgag
attgatggtggctccggcgtcatttcgctggtggggaagctggagcagaagcactatggc
ctccacagactggtggtccaggtgaacgacagagggcagccatcacagaccaccaccact
ctggttcatgtgtatgtaaatgagactctttccaattccacagtcgtggaggcccaggtg
gctaagagcctgagcacgtctctgaacaccaacattgccggtgaccccaactacgaccta
agcaaacagcggttaagcattgtcatcggagtagtttcgggcatcatgacggtcatcctc
attattctcgtcgtagtcatggcccgttattgccgccccaagaataagaatggctacgag
gccggcaagaaggatcacgaagacttcttcacaccacagcagcatgacaaatccaagaag
cccaagaaagataagaagaaacagaagtccaaacagccactctatagcagtattgtcact
gtagaggcctccaaacccaacgggcagcgctatgacggcgtcaatgagaagctgtcggac
agtccaggcatgggccgctaccgctcagtcaacggagggcccgggagtccagatttggcc
cggcactacaagtccagttcgccactccccactgtccagcttcacccgcagtcgccaaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgccaatacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaactatcaac
aaatacaacaaacaggggccgtttcgccgagtgaccttctcggtggtgagccagccccag
gaccctcaccagcagggatcgctgcagagctgctacgacagcggcctggacgagtcggag
acgcccagcagcaagagttcgtcgggcccccggctgggcgccctccccctgcccgaggac
agctacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgac
tcccggcccttgcctgacgtagccatgactggcaagtgcactcgggaatgcgacgagtac
ggccactcggactcctgctggatgcctgtgcgcacgtcgcccgagcgacggccatccaag
tcaaccaccaacccccaacaaccaaagctttccactttcatgagcggcagcggcagcggc
agcagcagcgccgagcagcccggcagccaagagaccctcgccatggccgccatggccaac
ggagaccccaccgccgctcacatgatgggcgaccgcaatcgcaacctgctcaacaagaag
atggcctcctcctcctcctcctatgaggcctttggctcgccttcctacggctcaccagga
ggcggggaggaggcgctgggccaccccaccgaggagatccctctggcacctactggggag
tacaagcccacatcctgtggcactctgacgcgacgggaggtttacctgtga
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integrated database retrieval system
